RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TMPRSS13Q9BYE2 586 aa14.12□□□□□ -0.15
LMNA-216ENST00000496738 KIF25Q9UIL4 384 aa14.12□□□□□ -0.15
LMNA-216ENST00000496738 SCP2D1Q9UJQ7 156 aa14.12□□□□□ -0.15
LMNA-216ENST00000496738 ZNF222Q9UK12 451 aa14.12□□□□□ -0.15
LMNA-216ENST00000496738 DOPEY1Q5JWR5 2465 aa14.12□□□□□ -0.15
LMNA-216ENST00000496738 MPTX1A8MV57 137 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 RLN1P04808 185 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 SCTP09683 121 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 ANXA7P20073 488 aaKnown RBP14.11□□□□□ -0.15
LMNA-216ENST00000496738 MDH2P40926 338 aaKnown RBP14.11□□□□□ -0.15
LMNA-216ENST00000496738 VAX1Q5SQQ9 334 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 MRGPRFQ96AM1 343 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 TRAPPC2LQ9UL33 140 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 CHD6Q8TD26 2715 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 A8MXK9 166 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 IFNL4K9M1U5 179 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 CLDN1O95832 211 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 COL8A2P25067 703 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 CDKN1AP38936 164 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 STUMQ69YW2 141 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 PRR18Q8N4B5 295 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 COQ2Q96H96 371 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 PRRT1Q99946 306 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 MED9Q9NWA0 146 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 MAB21L2Q9Y586 359 aa14.11□□□□□ -0.15
LMNA-216ENST00000496738 ZNF737O75373 536 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 EIF3GO75821 320 aaKnown RBP eCLIP14.1□□□□□ -0.15
LMNA-216ENST00000496738 NPY4RP50391 375 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 RRAS2P62070 204 aaPredicted RBP14.1□□□□□ -0.15
LMNA-216ENST00000496738 FGL1Q08830 312 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 FAM216BQ8N7L0 139 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 NECAP2Q9NVZ3 263 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 OR5H8P0DN80 308 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 GLIPR1P48060 266 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 SEC61A1P61619 476 aaKnown RBP14.1□□□□□ -0.15
LMNA-216ENST00000496738 HFEQ30201 348 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 TEX36Q5VZQ5 186 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 TMED4Q7Z7H5 227 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 C1orf87Q8N0U7 546 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 ZNF431Q8TF32 576 aaPredicted RBP14.1□□□□□ -0.15
LMNA-216ENST00000496738 SFT2D1Q8WV19 159 aa14.1□□□□□ -0.15
LMNA-216ENST00000496738 RIMS4Q9H426 269 aaPredicted RBP14.1□□□□□ -0.15
LMNA-216ENST00000496738 PPIAL4EA0A075B759 164 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 MEIKINA0A087WXM9 373 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 PPIAL4DF5H284 164 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 PPIAL4FP0DN26 164 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 KRBOX4Q5JUW0 171 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 DTX2Q86UW9 622 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 FGFRL1Q8N441 504 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 TMEM185AQ8NFB2 350 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 GAFA1Q96PS6 74 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 ZNF2Q9BSG1 426 aaPredicted RBP14.09□□□□□ -0.15
LMNA-216ENST00000496738 RAB1BQ9H0U4 201 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 CLEC4MQ9H2X3 399 aaPredicted RBP14.09□□□□□ -0.15
LMNA-216ENST00000496738 LIME1Q9H400 295 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 COL12A1Q99715 3063 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 TMEM30CPA0ZSE6 113 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 ZNF729A6NN14 1252 aaPredicted RBP14.09□□□□□ -0.15
LMNA-216ENST00000496738 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 FABP7O15540 132 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 FBP1P09467 338 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 ARRDC1Q8N5I2 433 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 MARCH1Q8TCQ1 289 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 SLC2A8Q9NY64 477 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 VSIG4Q9Y279 399 aa14.09□□□□□ -0.15
LMNA-216ENST00000496738 TANC2Q9HCD6 1990 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 C7orf66A4D0T2 115 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 LGALS8O00214 317 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.16
LMNA-216ENST00000496738 RAG2P55895 527 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 SPCS3P61009 180 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 HERPUD1Q15011 391 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 NIT2Q9NQR4 276 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 MIOXQ9UGB7 285 aa14.08□□□□□ -0.16
LMNA-216ENST00000496738 TMPRSS2O15393 492 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 S100A8P05109 93 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 NFYAP23511 347 aaPredicted RBP14.07□□□□□ -0.16
LMNA-216ENST00000496738 GPX4P36969 197 aaPredicted RBP14.07□□□□□ -0.16
LMNA-216ENST00000496738 EDDM3BP56851 147 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 ATPAF1Q5TC12 328 aaPredicted RBP14.07□□□□□ -0.16
LMNA-216ENST00000496738 ZNF880Q6PDB4 577 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 TMEM17Q86X19 198 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 TERB2Q8NHR7 220 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 IL1F10Q8WWZ1 152 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 KIRREL1Q96J84 757 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 DSCAMO60469 2012 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 UTP20O75691 2785 aaKnown RBP14.07□□□□□ -0.16
LMNA-216ENST00000496738 TRBV6-6A0A0A6YYG2 114 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 TRAV38-1A0A0B4J264 116 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 IGKV1-6A0A0C4DH72 117 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 OR5H14A6NHG9 310 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 NDUFS7O75251 213 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 TK1P04183 234 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 VSIG10L2P0DP72 767 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 PLA2G2AP14555 144 aa14.07□□□□□ -0.16
LMNA-216ENST00000496738 PI3P19957 117 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms