RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 TRAPPC2LQ9UL33 140 aa11.55□□□□□ -0.56
SCAP-213ENST00000494938 RNF114Q9Y508 228 aa11.55□□□□□ -0.56
SCAP-213ENST00000494938 PKD1L1Q8TDX9 2849 aa11.55□□□□□ -0.56
SCAP-213ENST00000494938 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 FOXI3A8MTJ6 420 aaPredicted RBP11.54□□□□□ -0.56
SCAP-213ENST00000494938 SOCS1O15524 211 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 KIR2DS4P43632 304 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 TMEM50BP56557 158 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 C22orf42Q6IC83 251 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 OR2W3Q7Z3T1 314 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 NR2C2APQ86WQ0 139 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 OR1L1Q8NH94 360 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 WFDC12Q8WWY7 111 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 CREB3L1Q96BA8 519 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 FAM3DQ96BQ1 224 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 NEDD4LQ96PU5 975 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 RAB18Q9NP72 206 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 MBNL3Q9NUK0 354 aaKnown RBP11.54□□□□□ -0.56
SCAP-213ENST00000494938 GFOD1Q9NXC2 390 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 SIGLEC9Q9Y336 463 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 DSCAML1Q8TD84 2053 aa11.54□□□□□ -0.56
SCAP-213ENST00000494938 A0A1W2PPE3 182 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 HBZP02008 142 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 CD24P25063 80 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
SCAP-213ENST00000494938 FGF9P31371 208 aaPredicted RBP11.53□□□□□ -0.56
SCAP-213ENST00000494938 CEACAM3P40198 252 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 GNG10P50151 68 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 HES5Q5TA89 166 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 LINC00311Q8N616 119 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 TXNL4BQ9NX01 149 aaKnown RBP11.53□□□□□ -0.56
SCAP-213ENST00000494938 STEAP1Q9UHE8 339 aa11.53□□□□□ -0.56
SCAP-213ENST00000494938 IGHV3-43A0A0B4J1X8 118 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 TMEM272A0A1B0GTI8 110 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 IFITM5A6NNB3 132 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 OOSP1A8MZH6 123 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 SDCBPO00560 298 aaPredicted RBP11.52□□□□□ -0.57
SCAP-213ENST00000494938 PDCD5O14737 125 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 IGHV3-43DP0DP04 118 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 ZNF134P52741 427 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 KIAA2026Q5HYC2 2103 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 C6orf183Q5T699 404 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 Q6ZPA2 131 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 C8orf31Q8N9H6 132 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 SGMS2Q8NHU3 365 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 CITED1Q99966 193 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.57
SCAP-213ENST00000494938 OR51E2Q9H255 320 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 TAF9BQ9HBM6 251 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 STUB1Q9UNE7 303 aa11.52□□□□□ -0.57
SCAP-213ENST00000494938 SLC31A2O15432 143 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 SPINT2O43291 252 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 NAPSAO96009 420 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 RAB3BP20337 219 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 MYL9P24844 172 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 BRS3P32247 399 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 EFNB2P52799 333 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 BLCAPP62952 87 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 MADCAM1Q13477 382 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 NEDD8Q15843 81 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 Q6ZS46 218 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 Q8N2B8 174 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 ST6GALNAC6Q969X2 333 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 OCSTAMPQ9BR26 566 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 RANBP3Q9H6Z4 567 aaPredicted RBP11.51□□□□□ -0.57
SCAP-213ENST00000494938 ZNF702PQ9H963 129 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 PLEKHJ1Q9NW61 149 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 HSF4Q9ULV5 492 aa11.51□□□□□ -0.57
SCAP-213ENST00000494938 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
SCAP-213ENST00000494938 A0A0B4J203 849 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 VEGFCP49767 419 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 Q3ZCU0 254 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 PLAC9Q5JTB6 97 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 THNSL2Q86YJ6 484 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 PRR18Q8N4B5 295 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 OR52L2PQ8NGH6 319 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 OR4C13Q8NGP0 309 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 CFHR4Q92496 578 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 RPEQ96AT9 228 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 ARHGAP5-AS1Q96IT6 56 aa11.5□□□□□ -0.57
SCAP-213ENST00000494938 RNF167Q9H6Y7 350 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms