RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ALOX12BO75342 701 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 TPM3P06753 285 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 SYT1P21579 422 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 CXCR1P25024 350 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 IL3RAP26951 378 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 HCCSP53701 268 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 TAS2R60P59551 318 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 RPL31P62899 125 aaKnown RBP2.34□□□□□ -2.03
SMC4-224ENST00000494612 IFFO1Q0D2I5 559 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 PSG3Q16557 428 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 HSP90B2PQ58FF3 399 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
SMC4-224ENST00000494612 CPTPQ5TA50 214 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 FAM9CQ8IZT9 166 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 DAW1Q8N136 415 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 OR5M1Q8NGP8 315 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 OR1P1Q8NH06 330 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 CYTH2Q99418 400 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 MED10Q9BTT4 135 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 CHRNA10Q9GZZ6 450 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 SYT4Q9H2B2 425 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 LINC00574Q9H8X3 128 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 STX18Q9P2W9 335 aaKnown RBP2.34□□□□□ -2.03
SMC4-224ENST00000494612 RWDD2AQ9UIY3 292 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 ENPP5Q9UJA9 477 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 MYO18BQ8IUG5 2567 aa2.34□□□□□ -2.04
SMC4-224ENST00000494612 MYLKQ15746 1914 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 ANAPC1Q9H1A4 1944 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 CACNA1EQ15878 2313 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 IQCF5A8MTL0 148 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 CENPBD1B2RD01 187 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 MFNGO00587 321 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 UPK1BO75841 260 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 TRAPPC6AO75865 159 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 TTC4O95801 387 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 CST4P01036 141 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 IGKV1-39P01597 117 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 IGKV1D-39P04432 117 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SLC35G6P0C7Q6 338 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 UGT2B10P36537 528 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 ANP32AP39687 249 aaKnown RBP2.33□□□□□ -2.04
SMC4-224ENST00000494612 GALR1P47211 349 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 KCNJ3P48549 501 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 VSNL1P62760 191 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 PRKCDQ05655 676 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 PRSS54Q6PEW0 395 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SSX6Q7RTT6 188 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 PDPNQ86YL7 162 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SGPP2Q8IWX5 399 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 CD302Q8IX05 232 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SLC7A5P1Q8MH63 180 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 ZCCHC24Q8N2G6 241 aaKnown RBP2.33□□□□□ -2.04
SMC4-224ENST00000494612 LINC00469Q8N7U9 141 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SLC25A29Q8N8R3 303 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 APCDD1LQ8NCL9 501 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 OR6K2Q8NGY2 324 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 TMEM239Q8WW34 195 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 TMEM234Q8WY98 164 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 HGDQ93099 445 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 OTUB2Q96DC9 234 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 OR2S2Q9NQN1 319 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SDHAF2Q9NX18 166 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 CLEC2DQ9UHP7 191 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 MRM2Q9UI43 246 aaKnown RBP2.33□□□□□ -2.04
SMC4-224ENST00000494612 VAX2Q9UIW0 290 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 NXT1Q9UKK6 140 aaKnown RBP2.33□□□□□ -2.04
SMC4-224ENST00000494612 RAB22AQ9UL26 194 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 RELNP78509 3460 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 PTPRJQ12913 1337 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 ACACAQ13085 2346 aa2.33□□□□□ -2.04
SMC4-224ENST00000494612 SCN1AP35498 2009 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 NAV2Q8IVL1 2488 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ZNF462Q96JM2 2506 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PIEZO2Q9H5I5 2752 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TRAV8-6A0A0B4J262 113 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 IGKV1-6A0A0C4DH72 117 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ZNF233A6NK53 670 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PRAMEF26H0Y7S4 382 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PIRO00625 290 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 CALUO43852 315 aaPredicted RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 P01737 135 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 RNASE2P10153 161 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 HTR2BP41595 481 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ACOT2P49753 483 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 GRB2P62993 217 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 SKP1P63208 163 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TFAMQ00059 246 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 C2orf80Q0P641 193 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PMS2P3Q13401 168 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 DYNC1I2Q13409 638 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 COTL1Q14019 142 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 MAD2L1BPQ15013 274 aaPredicted RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 ZBTB6Q15916 424 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 HHATQ5VTY9 493 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ZNF470Q6ECI4 717 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 FAHD1Q6P587 224 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms