RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 FAM90A20PA6NIJ5 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A8PA6NJQ4 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A7PA6NKC0 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A22PA8MWA6 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A12PA8MX19 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A5PA8MXJ8 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A23PA8MXZ1 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 CYB5R3P00387 301 aaPredicted RBP17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A15PP0C7V4 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A13PP0C7W8 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A14PP0C7W9 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A24PP0C7X0 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 INSIG2Q9Y5U4 225 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 TINAGQ9UJW2 476 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 G6PCP35575 357 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 SRSF9Q13242 221 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF40-203ENST00000493683 HES3Q5TGS1 186 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 FBXW9Q5XUX1 488 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 RPP25Q9BUL9 199 aaKnown RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 COL25A1Q9BXS0 654 aaPredicted RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 KLK13Q9UKR3 277 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 A0A1W2PPC1 479 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 IFITM10A6NMD0 228 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 ACAA1P09110 424 aaPredicted RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 PSG2P11465 335 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 IZUMO4Q1ZYL8 232 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 NRIP2Q9BQI9 281 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 PIGYQ3MUY2 71 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 ZNF880Q6PDB4 577 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 ADAT3Q96EY9 351 aaPredicted RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 MARS2Q96GW9 593 aaKnown RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 H0Y980 276 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 WISP3O95389 354 aaPredicted RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 SUCLG1P53597 346 aaKnown RBP17.57■□□□□ 0.4
RNF40-203ENST00000493683 FAM27BQ5VT28 67 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 KCNMB2Q9Y691 235 aa17.57■□□□□ 0.4
RNF40-203ENST00000493683 GBGT1Q8N5D6 347 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 WDR31Q8NA23 367 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 DIRC2Q96SL1 478 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 NPVFQ9HCQ7 196 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 FCGR3AP08637 254 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 J3QR06 171 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 DXOO77932 396 aaKnown RBP17.56■□□□□ 0.4
RNF40-203ENST00000493683 HSPB1P04792 205 aaKnown RBP17.56■□□□□ 0.4
RNF40-203ENST00000493683 HIST1H1BP16401 226 aaKnown RBP17.56■□□□□ 0.4
RNF40-203ENST00000493683 CD1BP29016 333 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
RNF40-203ENST00000493683 RND1Q92730 232 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 ADIPOR1Q96A54 375 aa17.56■□□□□ 0.4
RNF40-203ENST00000493683 ID1P41134 155 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 MAGEA5P43359 124 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 TUBD1Q9UJT1 453 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 HIGD1AQ9Y241 93 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 MYO7AQ13402 2215 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 SLC35E4Q6ICL7 350 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 OR51B2Q9Y5P1 312 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 COL5A1-AS1Q5SY13 56 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 OR2D3Q8NGH3 330 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 DSPPQ9NZW4 1301 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 TTC3P53804 2025 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 CDX4O14627 284 aaPredicted RBP17.55■□□□□ 0.4
RNF40-203ENST00000493683 RAB29O14966 203 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 C16orf82Q7Z2V1 217 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 APOBEC4Q8WW27 367 aaKnown RBP17.55■□□□□ 0.4
RNF40-203ENST00000493683 GHITMQ9H3K2 345 aa17.55■□□□□ 0.4
RNF40-203ENST00000493683 TRBV5-5A0A0J9YX44 114 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 A8MWL6 223 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 ASAH2BP0C7U1 165 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 CD40P25942 277 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 KIR3DL2P43630 455 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 SELENOTP62341 195 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 ZAR1Q86SH2 424 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 DIRC3C9JPN6 131 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 K7ERU9 68 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 EFNB2P52799 333 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 PAXXQ9BUH6 204 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 YBX2Q9Y2T7 364 aaKnown RBP17.54■□□□□ 0.4
RNF40-203ENST00000493683 DOCK1Q14185 1865 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 NAT1P18440 290 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 C9orf40Q8IXQ3 194 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 P2RX4Q99571 388 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 KIR2DL1P43626 348 aaPredicted RBP17.54■□□□□ 0.4
RNF40-203ENST00000493683 KIR2DL2P43627 348 aaPredicted RBP17.54■□□□□ 0.4
RNF40-203ENST00000493683 ZNF721Q8TF20 911 aa17.54■□□□□ 0.4
RNF40-203ENST00000493683 CCL3P10147 92 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 TEX30Q5JUR7 227 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 GCSAMQ8N6F7 178 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 MEX3AA1L020 520 aaKnown RBP17.53■□□□□ 0.4
RNF40-203ENST00000493683 FAM157AC9JC47 383 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 HYPMO75409 117 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 GCGP01275 180 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 CEACAM21Q3KPI0 293 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 LDLRAD3Q86YD5 345 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 LRRC75AQ8NAA5 344 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 ZNF98A6NK75 572 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 ZNF25P17030 456 aaPredicted RBP17.53■□□□□ 0.4
RNF40-203ENST00000493683 TP53RKQ96S44 253 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 TMEM238LA0A1B0GVL6 79 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 A6NJY4 79 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms