RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 OR4P4Q8NGL7 312 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 OR2V1Q8NHB1 315 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 ZNRF2Q8NHG8 242 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
CLK1-213ENST00000492793 GALMQ96C23 342 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 CFAP53Q96M91 514 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 TMEM56Q96MV1 263 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 METTL17Q9H7H0 456 aaPredicted RBP1.76□□□□□ -2.13
CLK1-213ENST00000492793 TUBA4BQ9H853 241 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 VPREB3Q9UKI3 123 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 ATG2BQ96BY7 2078 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 DHX57Q6P158 1386 aaKnown RBP1.75□□□□□ -2.13
CLK1-213ENST00000492793 IGSF23A1L1A6 192 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 EPPINO95925 133 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 FBP1P09467 338 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 OR4A8P0C604 315 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 RD3LP0DJH9 198 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 RAB8AP61006 207 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 ZNF181Q2M3W8 571 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 CENPWQ5EE01 88 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 HENMT1Q5T8I9 393 aaKnown RBP1.75□□□□□ -2.13
CLK1-213ENST00000492793 EBLN2Q6P2I7 272 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 SPNS3Q6ZMD2 512 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 TMEM25Q86YD3 366 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 DOLPP1Q86YN1 238 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 SELENOHQ8IZQ5 122 aaKnown RBP1.75□□□□□ -2.13
CLK1-213ENST00000492793 MUC15Q8N387 334 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 RNASEH2CQ8TDP1 164 aaKnown RBP1.75□□□□□ -2.13
CLK1-213ENST00000492793 GPR119Q8TDV5 335 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 SLC19A3Q9BZV2 496 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 ZNF286AQ9HBT8 521 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 ARAP3Q8WWN8 1544 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 MYO15BQ96JP2 1530 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 ATAD5Q96QE3 1844 aa1.75□□□□□ -2.13
CLK1-213ENST00000492793 TRPM3Q9HCF6 1732 aaPredicted RBP1.74□□□□□ -2.13
CLK1-213ENST00000492793 RAB3GAP2Q9H2M9 1393 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 MAP3K19Q56UN5 1328 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 CEP170Q5SW79 1584 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 IGHV3OR15-7A0A075B7D8 119 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 LIN7AO14910 233 aaPredicted RBP1.74□□□□□ -2.13
CLK1-213ENST00000492793 MPZL2O60487 215 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 ASS1P00966 412 aaKnown RBP1.74□□□□□ -2.13
CLK1-213ENST00000492793 LTAP01374 205 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 CRYGDP07320 174 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 GP1BAP07359 652 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 CPMP14384 443 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 ORM2P19652 201 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 GADD45AP24522 165 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 ADORA1P30542 326 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 BSPH1Q075Z2 132 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 TMED1Q13445 227 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 PDK2Q15119 407 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 OR8G1Q15617 311 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 SPIN4Q56A73 249 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 ACSBG2Q5FVE4 666 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 RBM48Q5RL73 367 aaKnown RBP1.74□□□□□ -2.13
CLK1-213ENST00000492793 HES3Q5TGS1 186 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 CCDC121Q6ZUS5 278 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 TCF24Q7RTU0 167 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 CRLF3Q8IUI8 442 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 C17orf78Q8N4C9 275 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 DNAAF3Q8N9W5 541 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 DYNC2LI1Q8TCX1 351 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 RORBQ92753 470 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 FAM210AQ96ND0 272 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 MED18Q9BUE0 208 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 NDEL1Q9GZM8 345 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 HSPE1-MOB4S4R3N1 261 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 MPDZO75970 2070 aa1.74□□□□□ -2.13
CLK1-213ENST00000492793 KIAA0232Q92628 1395 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 USP42Q9H9J4 1324 aaKnown RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 IGKV1-12A0A0C4DH73 117 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 HSBP1L1C9JCN9 74 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 PHYHO14832 338 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 SOX14O95416 240 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 IGKV1D-12P01611 117 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 CSRP1P21291 193 aaKnown RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 KDELR2P33947 212 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 COILP38432 576 aaPredicted RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 AKR1C2P52895 323 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 ACTBP60709 375 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 ACTG1P63261 375 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 GTF2BQ00403 316 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 XRCC4Q13426 336 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 XKRXQ6PP77 449 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 SLC13A5Q86YT5 568 aaPredicted RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 ZNF567Q8N184 647 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 C2orf73Q8N5S3 287 aaPredicted RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 OR10P1Q8NGE3 313 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 CHST5Q9GZS9 411 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 AICDAQ9GZX7 198 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 CHMP4BQ9H444 224 aaKnown RBP1.73□□□□□ -2.13
CLK1-213ENST00000492793 ASCL3Q9NQ33 180 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 TMEM216Q9P0N5 145 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 SCML1Q9UN30 329 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 SHANK3Q9BYB0 1731 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 CRB1P82279 1406 aa1.73□□□□□ -2.13
CLK1-213ENST00000492793 LOC102725191A0A1B0GVB3 256 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 TRPC5OSA6NMA1 111 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 C17orf98A8MV24 154 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms