RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	TMEM272	A0A1B0GTI8	110 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	FAM172BP	A6NC97	362 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	C12orf77	C9JDV5	145 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	BUB1B-PAK6	H3BSN5	160 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451		J3QR06	171 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	HAX1	O00165	279 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	F2RL2	O00254	374 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	SDCBP	O00560	298 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	SOCS1	O15524	211 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	SDC2	P34741	201 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	VEGFC	P49767	419 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	DYNLT3	P51808	116 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	LTC4S	Q16873	150 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	HLA-DRB5	Q30154	266 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	NR2C2AP	Q86WQ0	139 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	TAF15	Q92804	592 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	MMP28	Q9H239	520 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	RAB18	Q9NP72	206 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	PSG11	Q9UQ72	335 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451	HILPDA	Q9Y5L2	63 aa		11.17	□□□□□ -0.62
PTPN7-215	ENST00000492451		A0A1B0GUS0	222 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	METTL21EP	A6NDL7	271 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	POM121C	A8CG34	1229 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	OOSP1	A8MZH6	123 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	AIRE	O43918	545 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	NDUFA7	O95182	113 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	RCC1	P18754	421 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	BRS3	P32247	399 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451		Q3ZCU0	254 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	LDLRAD2	Q5SZI1	272 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	CCDC144NL	Q6NUI1	221 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451		Q6ZTK2	550 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	GPR141	Q7Z602	305 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	DYNAP	Q8N1N2	210 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	C8orf31	Q8N9H6	132 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	OR4F5	Q8NH21	305 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	MRPL30	Q8TCC3	161 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	YIPF6	Q96EC8	236 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	CENPO	Q9BU64	300 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	TAF9B	Q9HBM6	251 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	GFOD1	Q9NXC2	390 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	C1RL	Q9NZP8	487 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	PITPNC1	Q9UKF7	332 aa		11.16	□□□□□ -0.62
PTPN7-215	ENST00000492451	SMIM30	A4D0T7	59 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	TMEM127	O75204	238 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	NAPSA	O96009	420 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	HBZ	P02008	142 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	SMIM18	P0DKX4	95 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	SLC2A2	P11168	524 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	PAX6	P26367	422 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	MNDA	P41218	407 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	RPL5	P46777	297 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	RAG2	P55895	527 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	LOXL3	P58215	753 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	MADCAM1	Q13477	382 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	PLA1A	Q53H76	456 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	AWAT1	Q58HT5	328 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	TPTE2P1	Q5T6R2	138 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	SFXN4	Q6P4A7	337 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	MOB1B	Q7L9L4	216 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	PRR18	Q8N4B5	295 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	C3orf56	Q8N813	242 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	DTX3	Q8N9I9	347 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	OR13F1	Q8NGS4	319 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	OR10X1	Q8NGY0	326 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	PIFO	Q8TCI5	191 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	LEAP2	Q969E1	77 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	RAB3C	Q96E17	227 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	ARHGAP5-AS1	Q96IT6	56 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	PECR	Q9BY49	303 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	BEX1	Q9HBH7	125 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	ABRACL	Q9P1F3	81 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	GNG12	Q9UBI6	72 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	AK3	Q9UIJ7	227 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	DAPK2	Q9UIK4	370 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	MGAT4A	Q9UM21	535 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	MMP24	Q9Y5R2	645 aa		11.15	□□□□□ -0.62
PTPN7-215	ENST00000492451	TRBV6-6	A0A0A6YYG2	114 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	LY6L	H3BQJ8	138 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	IGHV3-7	P01780	117 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	GNG10	P50151	68 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	TMEM50B	P56557	158 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	SCAND1	P57086	179 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	MRPS15	P82914	257 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	HTD2	P86397	168 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	MXD1	Q05195	221 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	ARL6IP1	Q15041	203 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	LY6E	Q16553	131 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	CROCCP3	Q8IVE0	287 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	LINC00311	Q8N616	119 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	OR10R2	Q8NGX6	335 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	OR1L1	Q8NH94	360 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	UBALD1	Q8TB05	177 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	RPE	Q96AT9	228 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	GALM	Q96C23	342 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	RNF167	Q9H6Y7	350 aa		11.14	□□□□□ -0.63
PTPN7-215	ENST00000492451	C12orf4	Q9NQ89	552 aa		11.14	□□□□□ -0.63

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