RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 GALMQ96C23 342 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 SNX22Q96L94 193 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 LURAP1Q96LR2 239 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 CABLES2Q9BTV7 478 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 NCOR1P1Q9H4R4 102 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 PPP1R3CQ9UQK1 317 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 RBM7Q9Y580 266 aaKnown RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 ARFGEF3Q5TH69 2177 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-210ENST00000490808 RFPL4AA6NLU0 287 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 FAM25EA8MYX2 175 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 B9A039 149 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 RFPL4AL1F8VTS6 287 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 GPR31O00270 319 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 MGST3O14880 152 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 SPINT2O43291 252 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 IGHV1-46P01743 117 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 AADACP22760 399 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 IL2RGP31785 369 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-210ENST00000490808 LUMP51884 338 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-210ENST00000490808 RND3P61587 244 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 BAMBIQ13145 260 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 SLC9A3R2Q15599 337 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 ADIPOQQ15848 244 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF826PQ6ZT77 177 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 MOGAT3Q86VF5 341 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 LGI3Q8N145 548 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF561Q8N587 486 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 RTN4IP1Q8WWV3 396 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-210ENST00000490808 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 AKR1E2Q96JD6 320 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 TMEM246Q9BRR3 403 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 NMES1Q9C002 83 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 SLC5A7Q9GZV3 580 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 DYNLRB1Q9NP97 96 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 USF3Q68DE3 2245 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 PDZD2O15018 2839 aa8.62□□□□□ -1.03
HDAC3-210ENST00000490808 MED13LQ71F56 2210 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 IGHV3-64DA0A0J9YX35 117 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 NKX6-3A6NJ46 265 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 DBX1A6NMT0 343 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 RNF212BA8MTL3 300 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 L7N2F9 121 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 LHBP01229 141 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 CD8AP01732 235 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 RLN2P04090 185 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 SCTP09683 121 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 GABRA2P47869 451 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 COL10A1Q03692 680 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 ATXN7L3Q14CW9 347 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-210ENST00000490808 HMGN3Q15651 99 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 ESCO2Q56NI9 601 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 KRBOX4Q5JUW0 171 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 SECTM1Q8WVN6 248 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
HDAC3-210ENST00000490808 TRAV38-1A0A0B4J264 116 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 A0A0D9SG52 128 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 DUXBA0A1W2PPF3 345 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 WNT9BO14905 357 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 RGS13O14921 159 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 TUSC2O75896 110 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 PSG2P11465 335 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SLC25A4P12235 298 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 PI3P19957 117 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 LOXP28300 417 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-210ENST00000490808 H2BFSP57053 126 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 EFNB3Q15768 340 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF672Q499Z4 452 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-210ENST00000490808 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-210ENST00000490808 GCSAMQ8N6F7 178 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 BOLLQ8N9W6 283 aaKnown RBP8.6□□□□□ -1.03
HDAC3-210ENST00000490808 OR10V1Q8NGI7 309 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 IL1F10Q8WWZ1 152 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 C2orf50Q96LR7 162 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SPIN2AQ99865 258 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SPIN2BQ9BPZ2 258 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 FXYD6Q9H0Q3 95 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms