RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
COL2A1-207ENST00000490609 RAB25P57735 213 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 RAB40BQ12829 278 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 SMN1Q16637 294 aaKnown RBP12.11□□□□□ -0.47
COL2A1-207ENST00000490609 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
COL2A1-207ENST00000490609 GAPTQ8N292 157 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 OR13C5Q8NGS8 318 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 GPER1Q99527 375 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 FAM192AQ9GZU8 254 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 ING4Q9UNL4 249 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 BIRC6Q9NR09 4857 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 TMEM30CPA0ZSE6 113 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 I3L521 148 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 MPZL2O60487 215 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 WBP4O75554 376 aaKnown RBP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 FADS2O95864 444 aaKnown RBP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 ECI1P42126 302 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 ETV1P50549 477 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 RPS11P62280 158 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 LYPD6Q86Y78 171 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 C4orf3Q8WVX3 66 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 KCTD7Q96MP8 289 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 FGF20Q9NP95 211 aaPredicted RBP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 RCC2Q9P258 522 aaKnown RBP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 GMPPBQ9Y5P6 360 aa12.1□□□□□ -0.47
COL2A1-207ENST00000490609 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
COL2A1-207ENST00000490609 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 OGG1O15527 345 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 SERPINA2P20848 420 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 ZNF93P35789 620 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 GBX2P52951 348 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 GP2P55259 537 aaKnown RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-207ENST00000490609 OR2G6Q5TZ20 316 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 ODF3L1Q8IXM7 274 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 GPR148Q8TDV2 347 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 TMEM138Q9NPI0 162 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
COL2A1-207ENST00000490609 TRAV8-7A0A075B6U6 113 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 G3V318 75 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 GPX5O75715 221 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 CNTFRP26992 372 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 ADARB1P78563 741 aaKnown RBP12.08□□□□□ -0.48
COL2A1-207ENST00000490609 DOC2BQ14184 412 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 Q3ZCU0 254 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 ATAD3CQ5T2N8 411 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 DDI2Q5TDH0 399 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 SIGIRRQ6IA17 410 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 OR11H1Q8NG94 326 aa12.08□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
COL2A1-207ENST00000490609 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 LOC100130705A0A1B0GUX0 176 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 SNTNA6NMZ2 147 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 MAGEB3O15480 346 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 ATP5HO75947 161 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 RCC1P18754 421 aaPredicted RBP12.07□□□□□ -0.48
COL2A1-207ENST00000490609 BDKRB2P30411 391 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 SOX6P35712 828 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 RASSF2P50749 326 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 GNB1P62873 340 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
COL2A1-207ENST00000490609 LINC00596Q86U02 117 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 SBSPONQ8IVN8 264 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 OR10V1Q8NGI7 309 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 OR4K15Q8NH41 348 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 MRPL48Q96GC5 212 aaKnown RBP12.07□□□□□ -0.48
COL2A1-207ENST00000490609 RASL11BQ9BPW5 248 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 GON7Q9BXV9 100 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
COL2A1-207ENST00000490609 CLEC2DQ9UHP7 191 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 ORC6Q9Y5N6 252 aa12.07□□□□□ -0.48
COL2A1-207ENST00000490609 TNCP24821 2201 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 AIPO00170 330 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 SC5DO75845 299 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 HBZP02008 142 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 SNRPBP14678 240 aaKnown RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 CHATP28329 748 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 RUNX1Q01196 453 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 LSAMPQ13449 338 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 GNMTQ14749 295 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms