RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CPTPQ5TA50 214 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 NXNL2Q5VZ03 156 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 FBXW9Q5XUX1 488 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 LPCAT3Q6P1A2 487 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MED27Q6P2C8 311 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C12orf54Q6X4T0 127 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CYHR1Q6ZMK1 362 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 FAM183BPQ6ZVS7 135 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 STRADAQ7RTN6 431 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 ANGPTL5Q86XS5 388 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CBLN2Q8IUK8 224 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ATPAF2Q8N5M1 289 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C2orf73Q8N5S3 287 aaPredicted RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 Q8N976 141 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 HSD17B11Q8NBQ5 300 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ACBD4Q8NC06 268 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 OR4K2Q8NGD2 314 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 OR5AK3PQ8NH89 298 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 OR2V1Q8NHB1 315 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 NEK7Q8TDX7 302 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 OR5P2Q8WZ92 322 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 TM4SF18Q96CE8 201 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 FLYWCH2Q96CP2 140 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 NARS2Q96I59 477 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 ADTRPQ96IZ2 230 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 P2RX4Q99571 388 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 LXNQ9BS40 222 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 NDFIP1Q9BT67 221 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ZNF436Q9C0F3 470 aaPredicted RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 DCSTAMPQ9H295 470 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C14orf105Q9NVL8 296 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 FBXL3Q9UKT7 428 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 HSPB11Q9Y547 144 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 DCCP43146 1447 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C1orf167Q5SNV9 1468 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MAGI3Q5TCQ9 1506 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C4AP0C0L4 1744 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C4BP0C0L5 1744 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 DOCK2Q92608 1830 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MYO18AQ92614 2054 aaKnown RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 CAMTA1Q9Y6Y1 1673 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 DNMT1P26358 1616 aaKnown RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 A2MP01023 1474 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 CFTRP13569 1480 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 PALLDQ8WX93 1383 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 IGKV1D-13A0A0B4J2D9 117 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 HIDE1A8MVS5 230 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 H0Y980 276 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 AIPO00170 330 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 GABRPO00591 440 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 SLC16A4O15374 487 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 ERI3O43414 337 aaKnown RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 CHST10O43529 356 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 CD5LO43866 347 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 MPZL2O60487 215 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 GGCTO75223 188 aaKnown RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 TTC4O95801 387 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 IFNA5P01569 189 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 ORM1P02763 201 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 CRYBA1P05813 215 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 OR8U9P0C7N5 309 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 IGKV1-13P0DP09 117 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 ZNF25P17030 456 aaPredicted RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 GABRG2P18507 467 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 RAB3BP20337 219 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 ME2P23368 584 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 SLC6A1P30531 599 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 POLR2IP36954 125 aaKnown RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 TMEM33P57088 247 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 GABARAPL2P60520 117 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 RAB2AP61019 212 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 RAB5BP61020 215 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 IL5RAQ01344 420 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 CAV1Q03135 178 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 ZNF726P1Q15940 193 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 LRRC26Q2I0M4 334 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 RSPO1Q2MKA7 263 aaPredicted RBP2.29□□□□□ -2.04
SSR1-209ENST00000488834 OR10J3Q5JRS4 329 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 TPTE2P1Q5T6R2 138 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 XAF1Q6GPH4 301 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 DRAM2Q6UX65 266 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 WDR82Q6UXN9 313 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 SNX29P2Q8IUI4 249 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 FAM71AQ8IYT1 594 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 HS3ST5Q8IZT8 346 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 Q8N402 240 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 METTL13Q8N6R0 699 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 OR5AR1Q8NGP9 310 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 OR8U1Q8NH10 309 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 SFXN5Q8TD22 340 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 TMEM54Q969K7 222 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 TMEM203Q969S6 136 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
SSR1-209ENST00000488834 PIK3IP1Q96FE7 263 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms