RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 ORC5O43913 435 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 PDCD6O75340 191 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 UCHL1P09936 223 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 UBBP0CG47 229 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 FAM106CPP0CH98 169 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 FUT3P21217 361 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 RAB7AP51149 207 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 RPS25P62851 125 aaKnown RBP14.16□□□□□ -0.14
ITGB1-215ENST00000488494 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 NKAPLQ5M9Q1 402 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 C6orf183Q5T699 404 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 SYT6Q5T7P8 510 aaPredicted RBP14.16□□□□□ -0.14
ITGB1-215ENST00000488494 GLT8D1Q68CQ7 371 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 OR10K2Q6IF99 312 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 OR52M1Q8NGK5 317 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 GFOD1Q9NXC2 390 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 MOB4Q9Y3A3 225 aa14.16□□□□□ -0.14
ITGB1-215ENST00000488494 UBE2QL1A1L167 161 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 SPINT2O43291 252 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 AMY1AP04745 511 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 AMY2AP04746 511 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 LPLP06858 475 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 VSIG8P0DPA2 414 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 SRMP19623 302 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 MAP2K4P45985 399 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 REG1BP48304 166 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 LOXL3P58215 753 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 HES1Q14469 280 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 C1orf100Q5SVJ3 147 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 PRSS48Q7RTY5 328 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 OR8H3Q8N146 312 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 GAPTQ8N292 157 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 OCSTAMPQ9BR26 566 aa14.15□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A9PA6NNJ1 464 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 M0QZK8 103 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 CCRL2O00421 344 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 CA11O75493 328 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 HBZP02008 142 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 TMEM11P17152 192 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 RCC1P18754 421 aaPredicted RBP14.14□□□□□ -0.15
ITGB1-215ENST00000488494 MLLT11Q13015 90 aaPredicted RBP14.14□□□□□ -0.15
ITGB1-215ENST00000488494 TPBGQ13641 420 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 OR10V1Q8NGI7 309 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 OR1L1Q8NH94 360 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 CITED2Q99967 270 aaPredicted RBP14.14□□□□□ -0.15
ITGB1-215ENST00000488494 TMEM59Q9BXS4 323 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 GNG12Q9UBI6 72 aa14.14□□□□□ -0.15
ITGB1-215ENST00000488494 SLC22A1O15245 554 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 SLC31A2O15432 143 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 IGKV1D-33P01593 117 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 IGKV1-33P01594 117 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 GLAP06280 429 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 CHATP28329 748 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 HTR2CP28335 458 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 RPS27AP62979 156 aaKnown RBP14.13□□□□□ -0.15
ITGB1-215ENST00000488494 ZNF816Q0VGE8 651 aaPredicted RBP14.13□□□□□ -0.15
ITGB1-215ENST00000488494 UNC119Q13432 240 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 HNF4GQ14541 408 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 TMEM30BQ3MIR4 351 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 C9orf152Q5JTZ5 239 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 TRAT1Q6PIZ9 186 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 TMEM91Q6ZNR0 172 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 NDUFA11Q86Y39 141 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 LINC00311Q8N616 119 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 C8orf31Q8N9H6 132 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 OR6M1Q8NGM8 313 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 MRPL30Q8TCC3 161 aaKnown RBP14.13□□□□□ -0.15
ITGB1-215ENST00000488494 ISYNA1Q9NPH2 558 aa14.13□□□□□ -0.15
ITGB1-215ENST00000488494 IGHV3-72A0A0B4J1Y9 119 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 IGHV1-3A0A0C4DH29 117 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 ADARB2-AS1A8MUL3 147 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 BPNT1O95861 308 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 OPN1MWP04001 364 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 OPN1MW2P0DN77 364 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 OPN1MW3P0DN78 364 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 CPEP16870 476 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 PSMA1P25786 263 aaKnown RBP14.12□□□□□ -0.15
ITGB1-215ENST00000488494 IL3RAP26951 378 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 P2RY14Q15391 338 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 TRAM1Q15629 374 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 TBCEQ15813 527 aaPredicted RBP14.12□□□□□ -0.15
ITGB1-215ENST00000488494 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 THNSL2Q86YJ6 484 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 ZNF439Q8NDP4 499 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 NEDD4LQ96PU5 975 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 GFI1Q99684 422 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 MGLLQ99685 303 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 SULT4A1Q9BR01 284 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 NICN1Q9BSH3 213 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 TAF9BQ9HBM6 251 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 BLOC1S6Q9UL45 172 aa14.12□□□□□ -0.15
ITGB1-215ENST00000488494 A0A1W2PRX2 142 aa14.11□□□□□ -0.15
ITGB1-215ENST00000488494 ARL6IP5O75915 188 aa14.11□□□□□ -0.15
ITGB1-215ENST00000488494 ATP6V1G2O95670 118 aa14.11□□□□□ -0.15
ITGB1-215ENST00000488494 GAPDHP04406 335 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms