RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TSPAN14Q8NG11 270 aa14.68□□□□□ -0.06
COL1A1-207ENST00000486572 OR52M1Q8NGK5 317 aa14.68□□□□□ -0.06
COL1A1-207ENST00000486572 UBALD1Q8TB05 177 aa14.68□□□□□ -0.06
COL1A1-207ENST00000486572 PSG11Q9UQ72 335 aa14.68□□□□□ -0.06
COL1A1-207ENST00000486572 TCF19Q9Y242 345 aa14.68□□□□□ -0.06
COL1A1-207ENST00000486572 A0A087WXM4 84 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 LDLRAD4O15165 306 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 SPINT2O43291 252 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 JUNBP17275 347 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-207ENST00000486572 RCC1P18754 421 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-207ENST00000486572 GNG10P50151 68 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 ARHGDIBP52566 201 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 TMEM30BQ3MIR4 351 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 TPTE2P1Q5T6R2 138 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 Q6ZSV7 163 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 FAM89BQ8N5H3 189 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 MRPL30Q8TCC3 161 aaKnown RBP14.67□□□□□ -0.06
COL1A1-207ENST00000486572 FAAP24Q9BTP7 215 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 ZNF747Q9BV97 191 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 OR51E2Q9H255 320 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 VCX3AQ9NNX9 186 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 MBNL3Q9NUK0 354 aaKnown RBP14.67□□□□□ -0.06
COL1A1-207ENST00000486572 PLEKHJ1Q9NW61 149 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 PITPNC1Q9UKF7 332 aa14.67□□□□□ -0.06
COL1A1-207ENST00000486572 TMEM272A0A1B0GTI8 110 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 CLPSL1A2RUU4 121 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 OOSP1A8MZH6 123 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 LY6LH3BQJ8 138 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 SOCS1O15524 211 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 CHST1O43916 411 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 CD36P16671 472 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 LOXL3P58215 753 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 OLFML2AQ68BL7 652 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 ZNF554Q86TJ5 538 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 NR2C2APQ86WQ0 139 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 PRR18Q8N4B5 295 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 CHCHD6Q9BRQ6 235 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 ZNF696Q9H7X3 374 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 GFOD1Q9NXC2 390 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 KCNIP1Q9NZI2 227 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 ANK2Q01484 3957 aa14.66□□□□□ -0.06
COL1A1-207ENST00000486572 A6NDX4 124 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 FOXI3A8MTJ6 420 aaPredicted RBP14.65□□□□□ -0.06
COL1A1-207ENST00000486572 TSPAN9O75954 239 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 HBZP02008 142 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 GADD45AP24522 165 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 BRS3P32247 399 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 MADCAM1Q13477 382 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 CCDC144NLQ6NUI1 221 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 TPRA1Q86W33 373 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 OR56B1Q8NGI3 324 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 OR10X1Q8NGY0 326 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 OR1L1Q8NH94 360 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 LINC01006Q8NI28 216 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 TOMM40LQ969M1 308 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 RPEQ96AT9 228 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 KCTD7Q96MP8 289 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 C16orf95Q9H693 158 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 LIN7BQ9HAP6 207 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 TAF9BQ9HBM6 251 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 RAB22AQ9UL26 194 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 HSF4Q9ULV5 492 aa14.65□□□□□ -0.06
COL1A1-207ENST00000486572 IGHV3-43A0A0B4J1X8 118 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 LOC100506127A0A0U1RQW1 187 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 SMIM30A4D0T7 59 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 NOTOA8MTQ0 251 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 NAPSAO96009 420 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 IGHV3-43DP0DP04 118 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 MNDAP41218 407 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 VEGFCP49767 419 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 PLA2G7Q13093 441 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 Q3ZCU0 254 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 SHISA2Q6UWI4 295 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 CCBE1Q6UXH8 406 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-207ENST00000486572 TMEM219Q86XT9 240 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 C8orf31Q8N9H6 132 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 OR4C13Q8NGP0 309 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 NPFFR1Q9GZQ6 430 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 RANBP3Q9H6Z4 567 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-207ENST00000486572 CHMP1AQ9HD42 196 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-207ENST00000486572 GNG12Q9UBI6 72 aa14.64□□□□□ -0.07
COL1A1-207ENST00000486572 A0A1W2PPE3 182 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 SLC2A2P11168 524 aaPredicted RBP14.63□□□□□ -0.07
COL1A1-207ENST00000486572 RAB6AP20340 208 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 MOB1BQ7L9L4 216 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 LINC00311Q8N616 119 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 WFDC12Q8WWY7 111 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 ARHGAP5-AS1Q96IT6 56 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 RIMS4Q9H426 269 aaPredicted RBP14.63□□□□□ -0.07
COL1A1-207ENST00000486572 AK3Q9UIJ7 227 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 RNF114Q9Y508 228 aa14.63□□□□□ -0.07
COL1A1-207ENST00000486572 A0A0B4J203 849 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 SDC2P34741 201 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 EFNB2P52799 333 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 TMEM50BP56557 158 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 HMGN3Q15651 99 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 TIMM50Q3ZCQ8 353 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 FAM53AQ6NSI3 398 aaPredicted RBP14.62□□□□□ -0.07
COL1A1-207ENST00000486572 Q6ZTK2 550 aa14.62□□□□□ -0.07
COL1A1-207ENST00000486572 OR10V1Q8NGI7 309 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms