RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 Q8IYB0 196 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 FAM58AQ8N1B3 248 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 Q8N402 240 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 DEFB125Q8N687 156 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 OR10X1Q8NGY0 326 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 SPACA5Q96QH8 159 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 MBOAT4Q96T53 435 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 NEURL2Q9BR09 285 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 OSBPL10Q9BXB5 764 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 PPIL3Q9H2H8 161 aaKnown RBP4.93□□□□□ -1.62
SMC4-217ENST00000485867 SRD5A3Q9H8P0 318 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CMTM6Q9NX76 183 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CALYQ9NYX4 217 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 IDI2-AS1Q9NZ38 188 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 NUFIP1Q9UHK0 495 aaKnown RBP4.93□□□□□ -1.62
SMC4-217ENST00000485867 COPS3Q9UNS2 423 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 FBXO7Q9Y3I1 522 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 V9GYS6 101 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 IGHV7-81A0A0B4J1V7 117 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 A0A1W2PN81 502 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 BBIP1A8MTZ0 92 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 NDUFB8O95169 186 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 IFNGP01579 166 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 IL1AP01583 271 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 TTRP02766 147 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 CD7P09564 240 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 ZNF3P17036 446 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 BCL3P20749 454 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 BLVRBP30043 206 aaPredicted RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 CHRNA7P36544 502 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 IFNGR2P38484 337 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 SMIM11AP58511 58 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 LIPEQ05469 1076 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 BNIP1Q12981 228 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 ATXN7L3Q14CW9 347 aaPredicted RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 LTC4SQ16873 150 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 LYG2Q86SG7 212 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 YIPF7Q8N8F6 280 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 OR13A1Q8NGR1 328 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 PHLDA1Q8WV24 401 aaPredicted RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 ANP32BQ92688 251 aaKnown RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 FAM162AQ96A26 154 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 DAZAP1Q96EP5 407 aaKnown RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 TSSK6Q9BXA6 273 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 LINC00574Q9H8X3 128 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 SLC25A19Q9HC21 320 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 EXOSC4Q9NPD3 245 aaKnown RBP4.92□□□□□ -1.62
SMC4-217ENST00000485867 BAIAP2Q9UQB8 552 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
SMC4-217ENST00000485867 A0A1B0GTI1 187 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 DHRS7CA6NNS2 312 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 RIIAD1A6NNX1 92 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 PRR32B1ATL7 298 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 NPIPB11E5RHQ5 1161 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 SH2D1BO14796 132 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 HLA-DRB1P01911 266 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 NCK1P16333 377 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 ALOX5APP20292 161 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 ZP3P21754 424 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
SMC4-217ENST00000485867 NDPQ00604 133 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 SF3A3Q12874 501 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMC4-217ENST00000485867 MMDQ15546 238 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 UBE2V2Q15819 145 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 ECSCRQ19T08 205 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 ZNF829Q3KNS6 432 aaPredicted RBP4.91□□□□□ -1.62
SMC4-217ENST00000485867 SLC16A12Q6ZSM3 486 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 Q6ZSR3 168 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 RASSF6Q6ZTQ3 369 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 LAX1Q8IWV1 398 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 OR9Q2Q8NGE9 314 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 RFESDQ8TAC1 157 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 RTN4IP1Q8WWV3 396 aaPredicted RBP4.91□□□□□ -1.62
SMC4-217ENST00000485867 BTBD10Q9BSF8 475 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 COMMD4Q9H0A8 199 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 HMG20AQ9NP66 347 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 CMC2Q9NRP2 79 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 KRT84Q9NSB2 600 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 ARMC1Q9NVT9 282 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 SLC2A8Q9NY64 477 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 KIF25Q9UIL4 384 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 FOXA2Q9Y261 457 aaPredicted RBP4.91□□□□□ -1.62
SMC4-217ENST00000485867 GSTK1Q9Y2Q3 226 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 AP3M1Q9Y2T2 418 aa4.91□□□□□ -1.62
SMC4-217ENST00000485867 MSGN1A6NI15 193 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OR11H12B2RN74 326 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 SLC33A1O00400 549 aaPredicted RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 NME4O00746 187 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 RTL8CO15255 209 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 SRSF10O75494 262 aaKnown RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 SOX14O95416 240 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 SEMG1P04279 462 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 CSN3P07498 182 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 ZNF44P15621 663 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 HTR1FP30939 366 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 RRM2P31350 389 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 SSTR5P35346 364 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms