RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 AP4M1O00189 453 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 IL1AP01583 271 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 NFYBP25208 207 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 KCNJ3P48549 501 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 MTNR1BP49286 362 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 ZP1P60852 638 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 SCN1BQ07699 218 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-227ENST00000485102 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 TGIF2LXQ8IUE1 241 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 Q8NFD4 153 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 OR8U1Q8NH10 309 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 TMEM106AQ96A25 262 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 RFT1Q96AA3 541 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 PDCD1LG2Q9BQ51 273 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 MRPS26Q9BYN8 205 aaKnown RBP10.23□□□□□ -0.77
HDAC6-227ENST00000485102 BARHL1Q9BZE3 327 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 ABCG5Q9H222 651 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 PPIL3Q9H2H8 161 aaKnown RBP10.23□□□□□ -0.77
HDAC6-227ENST00000485102 ZCCHC4Q9H5U6 513 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 CALYQ9NYX4 217 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 IDI2-AS1Q9NZ38 188 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 DNAH7Q8WXX0 4024 aa10.23□□□□□ -0.77
HDAC6-227ENST00000485102 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 IGKV1D-33P01593 117 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 IGKV1-33P01594 117 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 ELANEP08246 267 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 RAB3AP20336 220 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 PSMB9P28065 219 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 CHATP28329 748 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 GTF2A1P52655 376 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 FOXE3Q13461 319 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 DOC2BQ14184 412 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 HES1Q14469 280 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 ATXN7L3Q14CW9 347 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 SYT6Q5T7P8 510 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 IZUMO1Q8IYV9 350 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 Q8N6K4 173 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 NKAIN3Q8N8D7 197 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 PXT1Q8NFP0 134 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 OR5M8Q8NGP6 311 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 OR13A1Q8NGR1 328 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 PGLYRP3Q96LB9 341 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 SCOCQ9UIL1 159 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 KIF25Q9UIL4 384 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 LINC00527Q9UJ94 153 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF580Q9UK33 172 aa10.22□□□□□ -0.77
HDAC6-227ENST00000485102 SIRT4Q9Y6E7 314 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-227ENST00000485102 MEIKINA0A087WXM9 373 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 TRAV24A0A0B4J272 114 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 TRBV5-5A0A0J9YX44 114 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 LINC01548A6NM66 108 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 E9PI62 339 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 SULT1B1O43704 296 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 TMEM127O75204 238 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 GPX5O75715 221 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 FSTP19883 344 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 GPR12P47775 334 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 IL13RA2Q14627 380 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 KISS1Q15726 138 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 RSBN1Q5VWQ0 802 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-227ENST00000485102 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 LINC00311Q8N616 119 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 C8orf31Q8N9H6 132 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 OR51A4Q8NGJ6 313 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 OR5D18Q8NGL1 313 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 OR13C9Q8NGT0 318 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 OR10AC1Q8NH08 325 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 EAF1Q96JC9 268 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-227ENST00000485102 SPACA5Q96QH8 159 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 TMEM138Q9NPI0 162 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 NDUFB11Q9NX14 153 aa10.21□□□□□ -0.77
HDAC6-227ENST00000485102 TRIM64CA6NLI5 447 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 IGHG4P01861 327 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 GAPDHP04406 335 aaKnown RBP10.2□□□□□ -0.78
HDAC6-227ENST00000485102 RPLP1P05386 114 aaKnown RBP10.2□□□□□ -0.78
HDAC6-227ENST00000485102 TMEM225BP0DP42 221 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 GZMHP20718 246 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 GLP1RP43220 463 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 CFHR3Q02985 330 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 FHL3Q13643 280 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 HNF4GQ14541 408 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 ACSM3Q53FZ2 586 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 PAN3Q58A45 887 aaKnown RBP10.2□□□□□ -0.78
HDAC6-227ENST00000485102 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-227ENST00000485102 ASCL4Q6XD76 172 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 Q8N9W7 124 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 OR8H1Q8NGG4 311 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 OR52M1Q8NGK5 317 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 LEAP2Q969E1 77 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 S100A13Q99584 98 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 PLSCR3Q9NRY6 295 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 TENM2Q9NT68 2774 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 ING3Q9NXR8 418 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 SSR3Q9UNL2 185 aa10.2□□□□□ -0.78
HDAC6-227ENST00000485102 RYR2Q92736 4967 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms