RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NEUROG1Q92886 237 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 SPSB1Q96BD6 273 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 GLRX2Q9NS18 164 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 S1PR2O95136 353 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-207ENST00000483888 LHFPL4Q7Z7J7 247 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 APCDD1LQ8NCL9 501 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 WNT16Q9UBV4 365 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 A0A1B0GU03 582 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 CKS2P33552 79 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 FOLR3P41439 243 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 RAB9AP51151 201 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 ZNF117Q03924 483 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 EIF3IQ13347 325 aaKnown RBP9.04□□□□□ -0.96
COL12A1-207ENST00000483888 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 TAAR3PQ9P1P4 343 aa9.04□□□□□ -0.96
COL12A1-207ENST00000483888 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-207ENST00000483888 TGFAP01135 160 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DL1P43626 348 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 HMGCLL1Q8TB92 370 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 TMEM208Q9BTX3 173 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 Q6ZSR6 202 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 PLCH1Q4KWH8 1693 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 TRPM3Q9HCF6 1732 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 LPAR2Q9HBW0 351 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 RPS23P62266 143 aaKnown RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 FXYD3Q14802 87 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 PERPQ96FX8 193 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 OCIAD1Q9NX40 245 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 ZNF318Q5VUA4 2279 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 MGPP08493 103 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DS2P43631 304 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 C8orf82Q6P1X6 216 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 CA13Q8N1Q1 262 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 RBFOX2O43251 390 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 LINC00869P0C866 280 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 TIMM23BQ5SRD1 257 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 CRYGNQ8WXF5 182 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 M0QZQ0 153 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 TBX6O95947 436 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-207ENST00000483888 IGHV4-34P06331 123 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DS5A0A0G2JLQ3 304 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 A0A0G2JNG1 304 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DS3K7RE56 304 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 PSG1P11464 419 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 MAS1LP35410 378 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 KIR2DS5Q14953 304 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 NEU1Q99519 415 aa9.03□□□□□ -0.96
COL12A1-207ENST00000483888 GAPTQ8N292 157 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 TMEM186Q96B77 213 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 MUCL1Q96DR8 90 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 DEFB118Q96PH6 123 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 WNT5BQ9H1J7 359 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 G6PC2Q9NQR9 355 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 THYN1Q9P016 225 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 TUBD1Q9UJT1 453 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 USP54Q70EL1 1684 aa9.02□□□□□ -0.96
COL12A1-207ENST00000483888 GAGE12BA1L429 117 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 RAMP1O60894 148 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 DHRS3O75911 302 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 LYZP61626 148 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 C12orf49Q9H741 205 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 CLN8Q9UBY8 286 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 TDRD15B5MCY1 1934 aaKnown RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 APOBEC3DQ96AK3 386 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 EDN1P05305 212 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 EFNB2P52799 333 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 CAMKMTQ7Z624 323 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 ZNF414Q96IQ9 312 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 KLF16Q9BXK1 252 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 TRAV8-4A0A0B4J246 113 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 WDYHV1Q96HA8 205 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 MYOZ1Q9NP98 299 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-207ENST00000483888 PHIPQ8WWQ0 1821 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 EPPINO95925 133 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 SLC25A30Q5SVS4 291 aa9.02□□□□□ -0.97
COL12A1-207ENST00000483888 A0A087WUJ7 227 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 ISG15P05161 165 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 HOXD9P28356 352 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-207ENST00000483888 ZNF260Q3ZCT1 412 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 OR51B2Q9Y5P1 312 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 OR2A4O95047 310 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 DNAL4O96015 105 aa9.01□□□□□ -0.97
COL12A1-207ENST00000483888 LGALS3P17931 250 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms