RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TBCEQ15813 527 aaPredicted RBP11.13□□□□□ -0.63
VARS-225ENST00000482996 TMEM30BQ3MIR4 351 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 C1orf100Q5SVJ3 147 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 UTF1Q5T230 341 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 TMEM203Q969S6 136 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 SLC25A33Q9BSK2 321 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 NOTCH1P46531 2555 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 C15orf65H3BRN8 121 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
VARS-225ENST00000482996 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 OR2F2O95006 317 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 CSF1P09603 554 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 CPEP16870 476 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 PSMB9P28065 219 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 HTR2CP28335 458 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 MAP2K4P45985 399 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 RAB7AP51149 207 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 RPS25P62851 125 aaKnown RBP11.12□□□□□ -0.63
VARS-225ENST00000482996 BLCAPP62952 87 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
VARS-225ENST00000482996 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 GPR141Q7Z602 305 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 OR8H3Q8N146 312 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 KCNG3Q8TAE7 436 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 UBALD1Q8TB05 177 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 RBM14Q96PK6 669 aaKnown RBP11.12□□□□□ -0.63
VARS-225ENST00000482996 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 MGLLQ99685 303 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 TMEM59Q9BXS4 323 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 SERTAD4Q9NUC0 356 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
VARS-225ENST00000482996 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
VARS-225ENST00000482996 UBE2QL1A1L167 161 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 CCDC160A6NGH7 325 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 M0QZK8 103 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 FBXO24O75426 580 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 IL3RAP26951 378 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 RANBP1P43487 201 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 Q3ZCU0 254 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 GAPTQ8N292 157 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 OR4K15Q8NH41 348 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 CFHR4Q92496 578 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 PLGRKTQ9HBL7 147 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 GNG12Q9UBI6 72 aa11.11□□□□□ -0.63
VARS-225ENST00000482996 IGHV3-43A0A0B4J1X8 118 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 SLC22A1O15245 554 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 TSPAN15O95858 294 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 BPNT1O95861 308 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 IGHV3-43DP0DP04 118 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
VARS-225ENST00000482996 EMX1Q04741 257 aaPredicted RBP11.1□□□□□ -0.63
VARS-225ENST00000482996 SIGIRRQ6IA17 410 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 TMEM91Q6ZNR0 172 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 C8orf31Q8N9H6 132 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 OR56B4Q8NH76 319 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 FAM110DQ8TAY7 271 aaPredicted RBP11.1□□□□□ -0.63
VARS-225ENST00000482996 OCSTAMPQ9BR26 566 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 ACOT13Q9NPJ3 140 aa11.1□□□□□ -0.63
VARS-225ENST00000482996 A0A1W2PPI3 338 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 CCRL2O00421 344 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 HSD17B6O14756 317 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 HBZP02008 142 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 GAPDHP04406 335 aaKnown RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 LPLP06858 475 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 SNRNP70P08621 437 aaKnown RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 CD37P11049 281 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 RCC1P18754 421 aaPredicted RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 CALRP27797 417 aaKnown RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 CHATP28329 748 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 LOXL3P58215 753 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 ZNF816Q0VGE8 651 aaPredicted RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 HES1Q14469 280 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 RAB11BQ15907 218 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 ABCA11PQ4W5N1 156 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 Q6ZS46 218 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 ZNF554Q86TJ5 538 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 PRR18Q8N4B5 295 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 OR1L1Q8NH94 360 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 URM1Q9BTM9 101 aaKnown RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 TM2D1Q9BX74 207 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 WNT10AQ9GZT5 417 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 TAF9BQ9HBM6 251 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
VARS-225ENST00000482996 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms