RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 CDRT4Q8N9R6 151 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 ZNF555Q8NEP9 628 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 OR51A7Q8NH64 312 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 OR10J5Q8NHC4 309 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 NEK7Q8TDX7 302 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 C2orf15Q8WU43 125 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 PYDC1Q8WXC3 89 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 C22orf15Q8WYQ4 148 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 AP3S1Q92572 193 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SERPINB11Q96P15 392 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 TSNAXQ99598 290 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 HOPXQ9BPY8 73 aaPredicted RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 ZNF251Q9BRH9 671 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 UTP23Q9BRU9 249 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 MAP1LC3CQ9BXW4 147 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SLC22A4Q9H015 551 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 METTL9Q9H1A3 318 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 ASB7Q9H672 318 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 PLEKHA1Q9HB21 404 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 XPNPEP1Q9NQW7 623 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 PARVAQ9NVD7 372 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 GID8Q9NWU2 228 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 IFNKQ9P0W0 207 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 TAC3Q9UHF0 121 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 HEY1Q9Y5J3 304 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 V9GYQ6 96 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 MYH10P35580 1976 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 PLXNA3P51805 1871 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 CNTLNQ9NXG0 1405 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 MTUS2Q5JR59 1369 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 LOC389332A0A1B0GUA5 103 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 A0A1B0GVG6 124 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SLC5A10A0PJK1 596 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TMEM213A2RRL7 107 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SMIM23A6NLE4 172 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 OR2AT4A6NND4 320 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 A8MWP4 228 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 MIF4GDA9UHW6 222 aaKnown RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 ATP6V1G2-DDX39BF2Z307 99 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 H7C2Y5 167 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 hCG_2039718K7EN88 272 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 UPK1AO00322 258 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 BIRC5O15392 142 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 VAPBO95292 243 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TNFAIP8O95379 198 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 PLEKHA8P1O95397 391 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 DEXIO95424 95 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 PSMG1O95456 288 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ETHE1O95571 254 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 FADS2O95864 444 aaKnown RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 IFNA5P01569 189 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TNNC2P02585 160 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 RLN2P04090 185 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TCRBP04435 133 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SLC2A1P11166 492 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 PTHLHP12272 177 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 HTR2CP28335 458 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 IMPA1P29218 277 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 CRABP1P29762 137 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 KDELR2P33947 212 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 CSKP41240 450 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 RPL14P50914 215 aaKnown RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 XKP51811 444 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 NKX2-5P52952 324 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 TMEM33P57088 247 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 UBE2KP61086 200 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ARF6P62330 175 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 STX4Q12846 297 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TAF1AQ15573 450 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 ZNHIT3Q15649 155 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 VAMP3Q15836 100 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 GUK1Q16774 197 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 NDUFAF6Q330K2 333 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 LINC00303Q3SY05 128 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 CDNFQ49AH0 187 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 HACD4Q5VWC8 232 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 CYHR1Q6ZMK1 362 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SMIM15Q7Z3B0 74 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 DPPA2Q7Z7J5 298 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SETD3Q86TU7 594 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 CRLF3Q8IUI8 442 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SYS1Q8N2H4 156 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 C2orf73Q8N5S3 287 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 OR2V1Q8NHB1 315 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 NT5CQ8TCD5 201 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ZFAND1Q8TCF1 268 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 FAM172AQ8WUF8 416 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 RNF133Q8WVZ7 376 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 FAM131CQ96AQ9 280 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 PRAP1Q96NZ9 151 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 OR2M4Q96R27 311 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TRIB3Q96RU7 358 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 PRRT1Q99946 306 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 COPS4Q9BT78 406 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 TMEM109Q9BVC6 243 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 COA1Q9GZY4 146 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 GABARAPL1Q9H0R8 117 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ANKHQ9HCJ1 492 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ARMC1Q9NVT9 282 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 DDIT4Q9NX09 232 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms