RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RORCP51449 518 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 DLX1P56177 255 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 AWAT1Q58HT5 328 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 ATAD3CQ5T2N8 411 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 ACOT12Q8WYK0 555 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 CMTM3Q96MX0 182 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 NEDD4LQ96PU5 975 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 SSX3Q99909 188 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 ZNF747Q9BV97 191 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 C16orf95Q9H693 158 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 BEX1Q9HBH7 125 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 MBNL3Q9NUK0 354 aaKnown RBP10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 IDI2-AS1Q9NZ38 188 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 CCDC59Q9P031 241 aaKnown RBP10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 RAB22AQ9UL26 194 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 SPATA2Q9UM82 520 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 AMMECR1Q9Y4X0 333 aaPredicted RBP10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 TENM1Q9UKZ4 2725 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 TRBV6-6A0A0A6YYG2 114 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 TMEM272A0A1B0GTI8 110 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 SMIM30A4D0T7 59 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 HSPB6O14558 160 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 TOR1AO14656 332 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 MMP23AO75900 390 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 ZNF182P17025 639 aaPredicted RBP10□□□□□ -0.81
CLCNKA-205ENST00000477360 CHATP28329 748 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 GLP1RP43220 463 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 RAG2P55895 527 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 CLDN12P56749 244 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 P2RY14Q15391 338 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 HLA-DRB5Q30154 266 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 LY6G6FQ5SQ64 297 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 SIGIRRQ6IA17 410 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 LINC00311Q8N616 119 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 C3orf56Q8N813 242 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 NEK7Q8TDX7 302 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 LPAR5Q9H1C0 372 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 MMP28Q9H239 520 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 BANF2Q9H503 90 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 ABCB10Q9NRK6 738 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 ETAA1Q9NY74 926 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 C1RLQ9NZP8 487 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 MGAT4AQ9UM21 535 aa10□□□□□ -0.81
CLCNKA-205ENST00000477360 A0A1W2PRD5 423 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 A0A1W2PRF3 423 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 A0A1W2PRM7 423 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 CCDC160A6NGH7 325 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 FOXI3A8MTJ6 420 aaPredicted RBP9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 LY6LH3BQJ8 138 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 C15orf65H3BRN8 121 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 H3BUX3 64 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 SPINT2O43291 252 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 SCGNO76038 276 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 MPIG6BO95866 241 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 BRS3P32247 399 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 SOX6P35712 828 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 ARL6IP1Q15041 203 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 IDNKQ5T6J7 187 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 PRAMEF5Q5TYX0 476 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 FOXB2Q5VYV0 432 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 DHRS7BQ6IAN0 325 aaPredicted RBP9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 SHISA2Q6UWI4 295 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 MOB1BQ7L9L4 216 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 PIFOQ8TCI5 191 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 AP3S1Q92572 193 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 DUX5Q96PT3 197 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 ABCG5Q9H222 651 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
CLCNKA-205ENST00000477360 A0A075B6Q4 140 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 J3QR06 171 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 NAPSAO96009 420 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 SNRPBP14678 240 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 KIR2DS4P43632 304 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 HTD2P86397 168 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 PRB3Q04118 309 aaPredicted RBP9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 MADCAM1Q13477 382 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 SSX2Q16385 188 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 OR10K2Q6IF99 312 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 LHFPL4Q7Z7J7 247 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 LGALS14Q8TCE9 139 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 ARL11Q969Q4 196 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 FAM46BQ96A09 425 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 NXF2Q9GZY0 626 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 ZNF286AQ9HBT8 521 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 GFOD1Q9NXC2 390 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 KCNIP1Q9NZI2 227 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 ZNF581Q9P0T4 197 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 TRAPPC2LQ9UL33 140 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 TCF19Q9Y242 345 aa9.98□□□□□ -0.81
CLCNKA-205ENST00000477360 A0A0A6YYH2 397 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms