RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 GZMHP20718 246 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 FUT6P51993 359 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 TMEM211Q6ICI0 200 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 C16orf82Q7Z2V1 217 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 M1APQ8TC57 530 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 RARRES3Q9UL19 164 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 C9J4A7 227 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 TP53I11O14683 189 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 NR2C1P13056 603 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 SDF2L1Q9HCN8 221 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 TMEM38BQ9NVV0 291 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 ERRFI1Q9UJM3 462 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 PPP1R3CQ9UQK1 317 aa11.73□□□□□ -0.53
SEMA4D-217ENST00000475255 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 A0A1W2PQM1 296 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 DKK1O94907 266 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 CYB5R3P00387 301 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 HBE1P02100 147 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 SPANXN5Q5MJ07 72 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 AAED1Q7RTV5 226 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 SMIM7Q9BQ49 75 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 RBM7Q9Y580 266 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 LOC102725191A0A1B0GVB3 256 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 EREGO14944 169 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 SYNGR1O43759 233 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 SERPINE2P07093 398 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 LIFP15018 202 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 SRPXP78539 464 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 CCL7P80098 99 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 ASCL4Q6XD76 172 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 RABEPKQ7Z6M1 372 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 MRPL41Q8IXM3 137 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 ZDHHC23Q8IYP9 409 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 ABHD3Q8WU67 409 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 C10orf35Q96D05 121 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 FOXB1Q99853 325 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 PCGF1Q9BSM1 259 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 OR2H1Q9GZK4 316 aa11.72□□□□□ -0.53
SEMA4D-217ENST00000475255 UCP1P25874 307 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 ZNF845Q96IR2 970 aaPredicted RBP11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 TRAPPC6AO75865 159 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 CD33P20138 364 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 IL24Q13007 206 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 Q6ZSR3 168 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 FOXL2NBQ6ZUU3 175 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 OR10A7Q8NGE5 316 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 SGCZQ96LD1 299 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 SLC25A22Q9H936 323 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 CBLN4Q9NTU7 201 aa11.71□□□□□ -0.53
SEMA4D-217ENST00000475255 COL6A3P12111 3177 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF816-ZNF321PA0A0X1KG74 233 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 IGKV1D-33P01593 117 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 IGKV1-33P01594 117 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 EGR1P18146 543 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 EIF3IQ13347 325 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 SMRP1Q8NCR6 262 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 MTCH1Q9NZJ7 389 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 FUT9Q9Y231 359 aa11.71□□□□□ -0.54
SEMA4D-217ENST00000475255 MAP1LC3B2A6NCE7 125 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 OR6C6A6NF89 314 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 RFPL3SP0C7P2 107 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 MAP1LC3BQ9GZQ8 125 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 LRRC3CA6NJW4 275 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 SCGB1D1O95968 90 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 OR4A8P0C604 315 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 F2RP25116 425 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 BAXQ07812 192 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 NCR3LG1Q68D85 454 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 OR13D1Q8NGV5 346 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 LHX4Q969G2 390 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 OR4C12Q96R67 309 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 PTRH2Q9Y3E5 179 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 PRR14LQ5THK1 2151 aa11.7□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF737O75373 536 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 FGF7P21781 194 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 RND2P52198 227 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 CARD18P57730 90 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms