RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 A0A1W2PRG6 482 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 VPS37CA5D8V6 355 aaPredicted RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 CD300LBA8K4G0 201 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 F8VP50 259 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MPHOSPH10O00566 681 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 LECT2O14960 151 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 EEF1E1O43324 174 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ERLIN1O75477 346 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 HSBP1O75506 76 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 PSKH1P11801 424 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 CNTFRP26992 372 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 GABRR2P28476 465 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 S100A2P29034 98 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MLF1P58340 268 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 YWHAEP62258 255 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 TOMM34Q15785 309 aaPredicted RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ATP6AP1LQ52LC2 224 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 TPRG1LQ5T0D9 272 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 IDNKQ5T6J7 187 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ERICH5Q6P6B1 374 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 EPGNQ6UW88 154 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 BZW1Q7L1Q6 419 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MARCH3Q86UD3 253 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 NIT1Q86X76 327 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 OR4A5Q8NH83 315 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 C22orf15Q8WYQ4 148 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 HIST1H2BAQ96A08 127 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ISOC2Q96AB3 205 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 CMBLQ96DG6 245 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ZMYND19Q96E35 227 aaPredicted RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 METTL26Q96S19 204 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 RETNLBQ9BQ08 111 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 PLEKHA1Q9HB21 404 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 C6orf50Q9HD87 102 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 SDHAF3Q9NRP4 125 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 AHSPQ9NZD4 102 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 RBM12B-AS1Q9P1G2 102 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 RPUSD1Q9UJJ7 312 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 FLVCR2Q9UPI3 526 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 SPHKAPQ2M3C7 1700 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 BCORL1Q5H9F3 1711 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 BAZ2BQ9UIF8 2168 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 NUMA1Q14980 2115 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ZC3H13Q5T200 1668 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ERBINQ96RT1 1412 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MADDQ8WXG6 1647 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH6Q9C0G6 4158 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 KNTC1P50748 2209 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 MYO7AQ13402 2215 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 COL18A1P39060 1754 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CHD1O14646 1710 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 MYOM1P52179 1685 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 LRRC9Q6ZRR7 1453 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 NRXN1Q9ULB1 1477 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 TRGV2A0A075B6R0 118 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 LCE6AA0A183 80 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 FAM240AA0A1B0GVK7 77 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SLC5A10A0PJK1 596 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF701M0R085 212 aaPredicted RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 M0R1B8 84 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 TCAPO15273 167 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 TRAPPC3O43617 180 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SLC25A20O43772 301 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 PLEKHA8P1O95397 391 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 RLN2P04090 185 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 KLK1P06870 262 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SOD3P08294 240 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 OR5AL1P0C617 328 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CECR9P0C854 216 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SCGB1C2P0DMR2 95 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CPMP14384 443 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 MSR1P21757 451 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ELK4P28324 431 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CRABP1P29762 137 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 RPS5P46782 204 aaKnown RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CLDN18P56856 261 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 GPR176Q14439 515 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 RCN1Q15293 331 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 Q499Y3 187 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CLEC12AQ5QGZ9 265 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 GLYATQ6IB77 296 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 GALNT10Q86SR1 603 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SETD3Q86TU7 594 aaPredicted RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CMTM8Q8IZV2 173 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CCDC148Q8NFR7 591 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 OR6K6Q8NGW6 343 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 OR6K3Q8NGY3 331 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SCGB1C1Q8TD33 95 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 C10orf105Q8TEF2 133 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 TWIST2Q8WVJ9 160 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 OR8D1Q8WZ84 308 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 CCL17Q92583 94 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ADTRPQ96IZ2 230 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 RILPQ96NA2 401 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 OR2M4Q96R27 311 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 BPIFA3Q9BQP9 254 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 NAA38Q9BRA0 125 aaKnown RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 C11orf70Q9BRQ4 267 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ANAPC13Q9BS18 74 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 COA1Q9GZY4 146 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms