RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 TMEM100Q9NV29 134 aa2.39□□□□□ -2.03
PRPF3-204ENST00000470824 FAIMQ9NVQ4 179 aa2.39□□□□□ -2.03
PRPF3-204ENST00000470824 VAX2Q9UIW0 290 aa2.39□□□□□ -2.03
PRPF3-204ENST00000470824 PSMD13Q9UNM6 376 aa2.39□□□□□ -2.03
PRPF3-204ENST00000470824 PUS1Q9Y606 427 aaKnown RBP eCLIP2.39□□□□□ -2.03
PRPF3-204ENST00000470824 TRIOO75962 3097 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 LAMA4Q16363 1823 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 TRAV8-6A0A0B4J262 113 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 PVALEFA0A1B0GWK0 134 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 GNG14A0A1W2PPG7 69 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF98A6NK75 572 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 ATP6V1G2-DDX39BF2Z307 99 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 PFDN6O15212 129 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 CCDC22O60826 627 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 RCBTB2O95199 551 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 DEXIO95424 95 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 TNNC2P02585 160 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 RPN2P04844 631 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 OR4E1P0C645 316 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 LCN1P31025 176 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 GTF2H1P32780 548 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 GALR1P47211 349 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 CDC34P49427 236 aaPredicted RBP2.38□□□□□ -2.03
PRPF3-204ENST00000470824 GNG2P59768 71 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 TNNC1P63316 161 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 TAL2Q16559 108 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 SMIM15Q7Z3B0 74 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 CYP4Z1Q86W10 505 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 SLC13A5Q86YT5 568 aaPredicted RBP2.38□□□□□ -2.03
PRPF3-204ENST00000470824 CYB561A3Q8NBI2 242 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 LHFPL5Q8TAF8 219 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
PRPF3-204ENST00000470824 CACNG8Q8WXS5 425 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 UTP23Q9BRU9 249 aaKnown RBP2.38□□□□□ -2.03
PRPF3-204ENST00000470824 SYT4Q9H2B2 425 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF229Q9UJW7 825 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 RAB23Q9ULC3 237 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF835Q9Y2P0 537 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 PATJQ8NI35 1801 aa2.38□□□□□ -2.03
PRPF3-204ENST00000470824 TTC28Q96AY4 2481 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 DMXL1Q9Y485 3027 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 MUC6Q6W4X9 2439 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 MIA3Q5JRA6 1907 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 TRAV8-7A0A075B6U6 113 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ISPDA4D126 451 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 J3QT63 122 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 COCHO43405 550 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 NDUFS6O75380 124 aaKnown RBP2.37□□□□□ -2.03
PRPF3-204ENST00000470824 VAPBO95292 243 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 IGLV2-8P01709 118 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 IFNA6P05013 189 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF286BP0CG31 522 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 COX5BP10606 129 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PRPS1L1P21108 318 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 BGNP21810 368 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 F8A1P23610 371 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PSMB5P28074 263 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 HSPA9P38646 679 aaKnown RBP2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PSMB2P49721 201 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ATP5J2P56134 94 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PPP1CAP62136 330 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 HPCAP84074 193 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PDK2Q15119 407 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 FAM222AQ5U5X8 452 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 KCTD16Q68DU8 428 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 IGFL3Q6UXB1 125 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 UNQ9165/PRO28630Q6UXU0 137 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 PLEKHG7Q6ZR37 379 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 SELENOHQ8IZQ5 122 aaKnown RBP2.37□□□□□ -2.03
PRPF3-204ENST00000470824 CA13Q8N1Q1 262 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 SYS1Q8N2H4 156 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF709Q8N972 641 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 OR6K2Q8NGY2 324 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 S100PBPQ96BU1 408 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 POTEKPQ9BYX7 375 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 OR52A5Q9H2C5 316 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 VAPAQ9P0L0 249 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ENPP5Q9UJA9 477 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 SLC7A11Q9UPY5 501 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ARL2BPQ9Y2Y0 163 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 USH1CQ9Y6N9 552 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 C2orf16Q68DN1 1984 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 TECTAO75443 2155 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF532Q9HCE3 1301 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 BDP1A6H8Y1 2624 aa2.37□□□□□ -2.03
PRPF3-204ENST00000470824 IGHV1-3A0A0C4DH29 117 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 FAM240AA0A1B0GVK7 77 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 TVP23AA6NH52 213 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 ZNF233A6NK53 670 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 SMIM23A6NLE4 172 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 COLCA2A8K830 154 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 LRRN3E7EW58 273 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 F8W036 122 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 ITGB1BP1O14713 200 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 SERPINA6P08185 405 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 FAM228BP0C875 321 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 IL3RAP26951 378 aa2.36□□□□□ -2.03
PRPF3-204ENST00000470824 PRSS3P35030 304 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms