RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 RASL10BQ96S79 203 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 RBM24Q9BX46 236 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 ZDHHC11Q9H8X9 412 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 RNF150Q9ULK6 438 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 ZNF816-ZNF321PA0A0X1KG74 233 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 OR5G3P0C626 314 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 PAX9P55771 341 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 GRB2P62993 217 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 OR1N1Q8NGS0 311 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 BADQ92934 168 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 PNRC2Q9NPJ4 139 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 CCL28Q9NRJ3 127 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 PLEK2Q9NYT0 353 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 RNF24Q9Y225 148 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 CPAMD8Q8IZJ3 1885 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 LIPT2A6NK58 231 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 C1QTNF9BB2RNN3 333 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 CCL25O15444 150 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 DEFA4P12838 97 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 CCL1P22362 96 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 CARD18P57730 90 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 TPPP2P59282 170 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 RPS16P62249 146 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 ID3Q02535 119 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 SPANXN5Q5MJ07 72 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 BAGE3Q86Y29 109 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 BAGE2Q86Y30 109 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 SPOCK3Q9BQ16 436 aa8.2□□□□□ -1.1
NHLRC3-203ENST00000470258 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 A0A0G2JRQ6 117 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 DUXBA0A1W2PPF3 345 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 PGPEP1LA6NFU8 196 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 CRYAAP02489 173 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 ADMP35318 185 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 ARL16Q0P5N6 197 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 ZP4Q12836 540 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 STPG4Q8N801 248 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 OR10V1Q8NGI7 309 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 PAGE4O60829 102 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 IGKV3-11P04433 115 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 SERPINE2P07093 398 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 SNAI3Q3KNW1 292 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 MRPL13Q9BYD1 178 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 KLRF1Q9NZS2 232 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 TAAR3PQ9P1P4 343 aa8.19□□□□□ -1.1
NHLRC3-203ENST00000470258 IGKV1D-13A0A0B4J2D9 117 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TRBV11-1A0A0K0K1C0 115 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 M0R135 149 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 IGKV1-13P0DP09 117 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 HOXB2P14652 356 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 BPIFB3P59826 476 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 UBE2G2P60604 165 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 EIF3IQ13347 325 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 NMSQ5H8A3 153 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TPTE2P1Q5T6R2 138 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 Q6ZN92 141 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 ERASQ7Z444 233 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 WDR5BQ86VZ2 330 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 SGMS2Q8NHU3 365 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 FAM131CQ96AQ9 280 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 ZNF799Q96GE5 643 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TMEM56Q96MV1 263 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 RPP25Q9BUL9 199 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 IL23AQ9NPF7 189 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 ALKBH4Q9NXW9 302 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TMEM56-RWDD3S4R434 201 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 RALGAPA1Q6GYQ0 2036 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 IGKV1-27A0A075B6S5 117 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 BLACEA4D250 179 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 ZNF814B7Z6K7 855 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 SERF1AO75920 110 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TNFP01375 233 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 HNRNPA1P09651 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 GFERP55789 205 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 MCEMP1Q8IX19 187 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 RPP25LQ8N5L8 163 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 OR4C12Q96R67 309 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 CACNG5Q9UF02 275 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 SCTP09683 121 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 CBLN1P23435 193 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 SRP14P37108 136 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 HNRNPA3P51991 378 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 EFNA3P52797 238 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 TMEM196Q5HYL7 178 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 OR5AU1Q8NGC0 362 aa8.18□□□□□ -1.1
NHLRC3-203ENST00000470258 GAL3ST2Q9H3Q3 398 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms