RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 AHCTF1Q8WYP5 2266 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 SPTBN1Q01082 2364 aaKnown RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 VPS8Q8N3P4 1428 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 GOLGA8QA0A0J9YX86 632 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 SLC5A10A0PJK1 596 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 UPK1AO00322 258 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 ZNF593O00488 134 aaPredicted RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 HLA-GP17693 338 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 IL12BP29460 328 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 SPAM1P38567 509 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 GDI2P50395 445 aaKnown RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 OR12D2P58182 307 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 USF2Q15853 346 aaPredicted RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 LINC00303Q3SY05 128 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 SYT6Q5T7P8 510 aaPredicted RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 PRR9Q5T870 116 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 ZNF470Q6ECI4 717 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 CLEC19AQ6UXS0 136 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 C16orf47Q6ZP98 133 aaPredicted RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 PRNTQ86SH4 94 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 NELFCDQ8IXH7 590 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 ATPAF2Q8N5M1 289 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 OR4K2Q8NGD2 314 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 METTL26Q96S19 204 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 PDCD1LG2Q9BQ51 273 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 PARVGQ9HBI0 331 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 SDHAF2Q9NX18 166 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 CHMP5Q9NZZ3 219 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 VAPAQ9P0L0 249 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
LSM5-209ENST00000468872 CLEC2DQ9UHP7 191 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
LSM5-209ENST00000468872 C2orf16Q68DN1 1984 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 MED13LQ71F56 2210 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ELP1O95163 1332 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 RYR2Q92736 4967 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ACACAQ13085 2346 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 RAB19A4D1S5 217 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 CNMDO75829 334 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 DHRS3O75911 302 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 CDK14O94921 469 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 CST4P01036 141 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 IGLV3-19P01714 112 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 OR4Q2P0C623 313 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 IDH2P48735 452 aaKnown RBP2.7□□□□□ -1.98
LSM5-209ENST00000468872 RBX1P62877 108 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 RPL10AP62906 217 aaKnown RBP2.7□□□□□ -1.98
LSM5-209ENST00000468872 STX3Q13277 289 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 FAM53BQ14153 422 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 TNXAQ16473 311 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ACTL10Q5JWF8 245 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 CCDC122Q5T0U0 273 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 FAHD1Q6P587 224 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 TBPL2Q6SJ96 375 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 FAM19A1Q7Z5A9 133 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 GAPTQ8N292 157 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 OR4D6Q8NGJ1 314 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 OR6K2Q8NGY2 324 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 FAM57AQ8TBR7 257 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 LGALS14Q8TCE9 139 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ORAOV1Q8WV07 137 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 TNFRSF14Q92956 283 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 SMIM8Q96KF7 97 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 TRNT1Q96Q11 434 aaKnown RBP2.7□□□□□ -1.98
LSM5-209ENST00000468872 SHCBP1LQ9BZQ2 653 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 PRORYQ9H606 182 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ACOT13Q9NPJ3 140 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 RMND1Q9NWS8 449 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 MS4A12Q9NXJ0 267 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 DHCR7Q9UBM7 475 aaKnown RBP2.7□□□□□ -1.98
LSM5-209ENST00000468872 MRM2Q9UI43 246 aaKnown RBP2.7□□□□□ -1.98
LSM5-209ENST00000468872 ANXA10Q9UJ72 324 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 NUP155O75694 1391 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 ANKRD30AQ9BXX3 1397 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 CACNA1EQ15878 2313 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 PHIPQ8WWQ0 1821 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 AK9Q5TCS8 1911 aa2.7□□□□□ -1.98
LSM5-209ENST00000468872 APCP25054 2843 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 MYOM3Q5VTT5 1437 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 ICE1Q9Y2F5 2266 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
LSM5-209ENST00000468872 CLDN34H7C241 214 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 MFNGO00587 321 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 SCN2BO60939 215 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 ZMPSTE24O75844 475 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 MPIP34949 423 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 OR2B6P58173 313 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 C2orf80Q0P641 193 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 SLAMF1Q13291 335 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 COTL1Q14019 142 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 CASP12Q6UXS9 341 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 ITPRIPQ8IWB1 547 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 LYPD1Q8N2G4 141 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 CCNYL1Q8N7R7 359 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 CCDC12Q8WUD4 166 aaPredicted RBP2.69□□□□□ -1.98
LSM5-209ENST00000468872 YIPF6Q96EC8 236 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 ARL5BQ96KC2 179 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms