RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SIX6O95475 246 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 DUS4LO95620 317 aaKnown RBP17.14■□□□□ 0.34
TMEM53-207ENST00000468117 IGKV1-13P0DP09 117 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 RPS2P15880 293 aaKnown RBP17.14■□□□□ 0.34
TMEM53-207ENST00000468117 UCP3P55916 312 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 EDDM3BP56851 147 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 PIGPP57054 158 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 SLC9A3R2Q15599 337 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 PHLDA2Q53GA4 152 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 PRR13Q9NZ81 148 aa17.14■□□□□ 0.34
TMEM53-207ENST00000468117 AKAP6Q13023 2319 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 ODAMA1E959 279 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 LYNX1G3V0Z9 82 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 TMPRSS2O15393 492 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 HSPA12AO43301 675 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 SLC22A5O76082 557 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 LYNX1P0DP58 116 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 SSTR5P35346 364 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 ABCA11PQ4W5N1 156 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 C11orf71Q6IPW1 123 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 H1FOOQ8IZA3 346 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-207ENST00000468117 SLC38A6Q8IZM9 456 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 PHB2Q99623 299 aa17.14■□□□□ 0.33
TMEM53-207ENST00000468117 CLEC4MQ9H2X3 399 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-207ENST00000468117 NPIPB11E5RHQ5 1161 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 SFT2D2O95562 160 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 HBZP02008 142 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 DANCRP0C864 163 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 H2BFSP57053 126 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 HFEQ30201 348 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 C11orf88Q6PI97 169 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 MEX3BQ6ZN04 569 aaKnown RBP17.13■□□□□ 0.33
TMEM53-207ENST00000468117 NLRC3Q7RTR2 1065 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 OR5D13Q8NGL4 314 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 RSRP1Q9BUV0 290 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 SLC2A9Q9NRM0 540 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 GNRHRP30968 328 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 P2RX3P56373 397 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 C6orf183Q5T699 404 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 DCAF12L2Q5VW00 463 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 KCTD9Q7L273 389 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 LDLRAD3Q86YD5 345 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 GALMQ96C23 342 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 WDR89Q96FK6 387 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-207ENST00000468117 DNTTIP1Q9H147 329 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 DLL4Q9NR61 685 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 OR2W1Q9Y3N9 320 aa17.13■□□□□ 0.33
TMEM53-207ENST00000468117 USF3Q68DE3 2245 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 TEX13DA0A0J9YY54 714 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-207ENST00000468117 SIGLEC5O15389 551 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 COL8A2P25067 703 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 IL2RGP31785 369 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 FGFRL1Q8N441 504 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 ARL11Q969Q4 196 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 LURAP1Q96LR2 239 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 SLC5A7Q9GZV3 580 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 LAMP3Q9UQV4 416 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 LRRK2Q5S007 2527 aa17.12■□□□□ 0.33
TMEM53-207ENST00000468117 YLPM1P49750 1951 aaKnown RBP17.12■□□□□ 0.33
TMEM53-207ENST00000468117 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 A6NNC1 897 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 HEXAP06865 529 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 CEACAM6P40199 344 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 FAM53AQ6NSI3 398 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-207ENST00000468117 SGPP2Q8IWX5 399 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 ZNF565Q8N9K5 539 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 RFESDQ8TAC1 157 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 RTN4IP1Q8WWV3 396 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-207ENST00000468117 PARP12Q9H0J9 701 aaKnown RBP17.11■□□□□ 0.33
TMEM53-207ENST00000468117 RDH8Q9NYR8 311 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 PIPOXQ9P0Z9 390 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 DOCK11Q5JSL3 2073 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 NKX6-3A6NJ46 265 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 C1QBP02746 253 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 ANKRD55Q3KP44 614 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 ZNF818PQ6ZRF7 136 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 NOXA1Q86UR1 476 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 DTX2Q86UW9 622 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 RAB1BQ9H0U4 201 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 FAM234AQ9H0X4 552 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 UBTD1Q9HAC8 227 aa17.11■□□□□ 0.33
TMEM53-207ENST00000468117 C15orf65H3BRN8 121 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 CCSO14618 274 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 LY6HO94772 140 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 OR2A4O95047 310 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 LY6G6FQ5SQ64 297 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 LPCAT3Q6P1A2 487 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 OR52L2PQ8NGH6 319 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 OR2T35Q8NGX2 323 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 OR2A7Q96R45 310 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 CCL28Q9NRJ3 127 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 FAM208BQ5VWN6 2430 aa17.1■□□□□ 0.33
TMEM53-207ENST00000468117 HSD17B6O14756 317 aa17.09■□□□□ 0.33
TMEM53-207ENST00000468117 IFNA2P01563 188 aa17.09■□□□□ 0.33
TMEM53-207ENST00000468117 CRYBG3Q68DQ2 2970 aa17.09■□□□□ 0.33
TMEM53-207ENST00000468117 ZNF486Q96H40 463 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-207ENST00000468117 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-207ENST00000468117 DBX1A6NMT0 343 aa17.09■□□□□ 0.33
TMEM53-207ENST00000468117 GIPP09681 153 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms