RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 GNG10P50151 68 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 GTF2A1P52655 376 aaPredicted RBP10.65□□□□□ -0.7
CHD3-207ENST00000466233 MED21Q13503 144 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 LY6G6FQ5SQ64 297 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 C6orf183Q5T699 404 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 MOB3BQ86TA1 216 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 FAM71E2Q8N5Q1 922 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 OR10K1Q8NGX5 313 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 APH1BQ8WW43 257 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 THRSPQ92748 146 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 DCLRE1BQ9H816 532 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 C8orf4Q9NR00 106 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 AASSQ9UDR5 926 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 ING4Q9UNL4 249 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 DIMT1Q9UNQ2 313 aaKnown RBP10.65□□□□□ -0.7
CHD3-207ENST00000466233 EXOSC1Q9Y3B2 195 aaKnown RBP10.65□□□□□ -0.7
CHD3-207ENST00000466233 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
CHD3-207ENST00000466233 MCRIP1C9JLW8 97 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 WBP4O75554 376 aaKnown RBP10.64□□□□□ -0.71
CHD3-207ENST00000466233 SC5DO75845 299 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 IGHG4P01861 327 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 MYL12AP19105 171 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 HOXD3P31249 432 aaPredicted RBP10.64□□□□□ -0.71
CHD3-207ENST00000466233 CFHR3Q02985 330 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 GPR50Q13585 617 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 HNF4GQ14541 408 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 Q499Y3 187 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
CHD3-207ENST00000466233 PQLC1Q8N2U9 271 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 OR5M8Q8NGP6 311 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 S1PR3Q99500 378 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 RASL11BQ9BPW5 248 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 GHRLQ9UBU3 117 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 LRRC42Q9Y546 428 aa10.64□□□□□ -0.71
CHD3-207ENST00000466233 AIPO00170 330 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 LANCL1O43813 399 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 IGHV3-7P01780 117 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 CD1AP06126 327 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 SOX6P35712 828 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 ETV1P50549 477 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 INSL3P51460 131 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 TAS2R43P59537 309 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 LTC4SQ16873 150 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 ATAD3CQ5T2N8 411 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 ZNF555Q8NEP9 628 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 GHSRQ92847 366 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 RAX2Q96IS3 184 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 ZNF184Q99676 751 aaPredicted RBP10.63□□□□□ -0.71
CHD3-207ENST00000466233 S100A14Q9HCY8 104 aa10.63□□□□□ -0.71
CHD3-207ENST00000466233 MBNL3Q9NUK0 354 aaKnown RBP10.63□□□□□ -0.71
CHD3-207ENST00000466233 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
CHD3-207ENST00000466233 SERPINA2P20848 420 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 PSMB8P28062 276 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 VHLP40337 213 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 FHL3Q13643 280 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 SLC22A6Q4U2R8 563 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 XAF1Q6GPH4 301 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 ZNF485Q8NCK3 441 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 MYOZ3Q8TDC0 251 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 TRAPPC2LQ9UL33 140 aa10.62□□□□□ -0.71
CHD3-207ENST00000466233 LSM4Q9Y4Z0 139 aaKnown RBP10.62□□□□□ -0.71
CHD3-207ENST00000466233 TRBV5-7A0A0A0MS05 114 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 A0A1W2PPE3 182 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 LINC01548A6NM66 108 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 C12orf77C9JDV5 145 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 FUT3P21217 361 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 VDAC1P21796 283 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 RPS11P62280 158 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHD3-207ENST00000466233 HTD2P86397 168 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 RUNX1Q01196 453 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 CT45A1Q5HYN5 189 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 SYT6Q5T7P8 510 aaPredicted RBP10.61□□□□□ -0.71
CHD3-207ENST00000466233 OR2G6Q5TZ20 316 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 TTC23Q5W5X9 447 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 LYPD6Q86Y78 171 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 NKAIN3Q8N8D7 197 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 SETD9Q8NE22 299 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 CT45A3Q8NHU0 189 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 NEK7Q8TDX7 302 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 TMEM80Q96HE8 168 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 PGLYRP3Q96LB9 341 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 UQCC2Q9BRT2 126 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 GNG12Q9UBI6 72 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
CHD3-207ENST00000466233 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
CHD3-207ENST00000466233 TRAV39A0A0B4J263 110 aa10.6□□□□□ -0.71
CHD3-207ENST00000466233 RPLP1P05386 114 aaKnown RBP10.6□□□□□ -0.71
CHD3-207ENST00000466233 REG1BP48304 166 aa10.6□□□□□ -0.71
CHD3-207ENST00000466233 ZNF134P52741 427 aa10.6□□□□□ -0.71
CHD3-207ENST00000466233 DOC2BQ14184 412 aa10.6□□□□□ -0.71
CHD3-207ENST00000466233 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
CHD3-207ENST00000466233 RAB12Q6IQ22 244 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms