RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SNTNA6NMZ2 147 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 C15orf65H3BRN8 121 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 MAGEB3O15480 346 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 HTR3BO95264 441 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 RPSAP08865 295 aaKnown RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 IGHV3-43DP0DP04 118 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 ZIK1Q3SY52 487 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 Q3ZCU0 254 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 OR6Q1Q8NGQ2 317 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 MRPL48Q96GC5 212 aaKnown RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 MYCBPQ99417 103 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-220ENST00000464800 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 ALG8Q9BVK2 526 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 GHITMQ9H3K2 345 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 IFT22Q9H7X7 185 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 DHDHQ9UQ10 334 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 WSB1Q9Y6I7 421 aa11.33□□□□□ -0.6
MCF2L-220ENST00000464800 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 TMEM212A6NML5 194 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 E9PI62 339 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 G3V318 75 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 EI24O14681 340 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 SLC31A2O15432 143 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 ORC5O43913 435 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 ATP5HO75947 161 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 IGLV1-40P01703 118 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 RAB3AP20336 220 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 PPIFP30405 207 aaKnown RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 ZNF137PP52743 207 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 MMDQ15546 238 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 SLC25A48Q6ZT89 311 aaKnown RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 OR5AK2Q8NH90 309 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 PYDC1Q8WXC3 89 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
MCF2L-220ENST00000464800 PDCD1LG2Q9BQ51 273 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
MCF2L-220ENST00000464800 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
MCF2L-220ENST00000464800 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 CIB2O75838 187 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
MCF2L-220ENST00000464800 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-220ENST00000464800 PARP11Q9NR21 331 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 FAM53CQ9NYF3 392 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
MCF2L-220ENST00000464800 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 LINC01619G3V211 115 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 AIPO00170 330 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 FADS2O95864 444 aaKnown RBP11.3□□□□□ -0.6
MCF2L-220ENST00000464800 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 OR8U9P0C7N5 309 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 GABRB1P18505 474 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 RAB9AP51151 201 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ALDH3A2P51648 485 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 GBX2P52951 348 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-220ENST00000464800 SLURP1P55000 103 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 LSAMPQ13449 338 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ZNF529Q6P280 563 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ACSM6Q6P461 480 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ASCL4Q6XD76 172 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 OR51A2Q8NGJ7 313 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 OR52N1Q8NH53 320 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ALX4Q9H161 411 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-220ENST00000464800 EDA2RQ9HAV5 297 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 AMBNQ9NP70 447 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 RAB9BQ9NP90 201 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 ERVK13-1Q9NX77 482 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 MRPS28Q9Y2Q9 187 aaKnown RBP11.3□□□□□ -0.6
MCF2L-220ENST00000464800 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
MCF2L-220ENST00000464800 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
MCF2L-220ENST00000464800 SPINT2O43291 252 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 CDRT1O95170 752 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
MCF2L-220ENST00000464800 VHLP40337 213 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 SOX2P48431 317 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 MRPL28Q13084 256 aaKnown RBP11.29□□□□□ -0.6
MCF2L-220ENST00000464800 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 ATAD3CQ5T2N8 411 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 CBR4Q8N4T8 237 aa11.29□□□□□ -0.6
MCF2L-220ENST00000464800 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms