RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
CLK1-208ENST00000464454 CRABP1P29762 137 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 CD151P48509 253 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 FAM3AP98173 230 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 EXOC3L4Q17RC7 722 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 SPATA24Q86W54 205 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 ZBTB8OSQ8IWT0 167 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 OR9I1Q8NGQ6 314 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 OR11L1Q8NGX0 322 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 GALMQ96C23 342 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 ATP6V1G3Q96LB4 118 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 FAM210AQ96ND0 272 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 C1orf109Q9NX04 203 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 CD300AQ9UGN4 299 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 LINC00854A0A1B0GVQ3 168 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 TRPC5OSA6NMA1 111 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 F5H5K5 113 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 F8VZ95 297 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 KLRC4-KLRK1H3BQV0 150 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 DENRO43583 198 aaKnown RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 SLC25A20O43772 301 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 MPZL2O60487 215 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 SCN2BO60939 215 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 CDK14O94921 469 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 OR12D1P0DN82 309 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 PVALBP20472 110 aaPredicted RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 GADD45AP24522 165 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 GABRA3P34903 492 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 STC1P52823 247 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 DLX6P56179 175 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 GTF2BQ00403 316 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 TSPAN31Q12999 210 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 SLAMF1Q13291 335 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 PMS2P3Q13401 168 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 HENMT1Q5T8I9 393 aaKnown RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 NIPAL1Q6NVV3 410 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 NOXRED1Q6NXP6 359 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 VN1R4Q7Z5H5 301 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 SLC13A5Q86YT5 568 aaPredicted RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 LMX1AQ8TE12 382 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 ZCCHC13Q8WW36 166 aaKnown RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 NDEL1Q9GZM8 345 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 CHST5Q9GZS9 411 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 METTL17Q9H7H0 456 aaPredicted RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 ZNF286AQ9HBT8 521 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 MRPL16Q9NX20 251 aaKnown RBP1.86□□□□□ -2.11
CLK1-208ENST00000464454 GMEB1Q9Y692 573 aa1.86□□□□□ -2.11
CLK1-208ENST00000464454 BRD4O60885 1362 aaPredicted RBP1.85□□□□□ -2.11
CLK1-208ENST00000464454 EIF4G1Q04637 1599 aaKnown RBP1.85□□□□□ -2.11
CLK1-208ENST00000464454 B4DEV8 164 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 F5H5T6 163 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 G3V3Q6 166 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 J3QLI3 93 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 TP53I11O14683 189 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 FBP1P09467 338 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 CTSEP14091 401 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 PSMA1P25786 263 aaKnown RBP1.85□□□□□ -2.11
CLK1-208ENST00000464454 GABARAPL2P60520 117 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 OR8G1Q15617 311 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 HES3Q5TGS1 186 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 CLEC6AQ6EIG7 209 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 SCXQ7RTU7 201 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 MSRB3Q8IXL7 192 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 OR10D4PQ8NGN7 298 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 OR5K1Q8NHB7 308 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 CD200R1Q8TD46 325 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 TAMM41Q96BW9 452 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 EBNA1BP2Q99848 306 aaKnown RBP1.85□□□□□ -2.11
CLK1-208ENST00000464454 ZNF251Q9BRH9 671 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 C11orf49Q9H6J7 331 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 SPACA1Q9HBV2 294 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 TMEM216Q9P0N5 145 aa1.85□□□□□ -2.11
CLK1-208ENST00000464454 LTBP2Q14767 1821 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 IGKV1-12A0A0C4DH73 117 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 TMEM213A2RRL7 107 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 SDHAF1A6NFY7 115 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 ZNF878C9JN71 531 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 SMLR1H3BR10 107 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 H3BSA7 217 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 K7EQS6 105 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 M0QYV0 167 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 TOR1AO14656 332 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 ZNF73O43830 326 aaPredicted RBP1.84□□□□□ -2.11
CLK1-208ENST00000464454 NDUFS6O75380 124 aaKnown RBP1.84□□□□□ -2.11
CLK1-208ENST00000464454 IGKV1D-12P01611 117 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 RD3LP0DJH9 198 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
CLK1-208ENST00000464454 SULT1A2P50226 295 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 PSMD7P51665 324 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 ZNHIT3Q15649 155 aaPredicted RBP1.84□□□□□ -2.11
CLK1-208ENST00000464454 SPIN4Q56A73 249 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 HSP90B2PQ58FF3 399 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 CENPWQ5EE01 88 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 EBLN2Q6P2I7 272 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 IQCF2Q8IXL9 164 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 BOD1L2Q8IYS8 172 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 C2orf73Q8N5S3 287 aaPredicted RBP1.84□□□□□ -2.11
CLK1-208ENST00000464454 ZNRF2Q8NHG8 242 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 PHOSPHO2Q8TCD6 241 aa1.84□□□□□ -2.11
CLK1-208ENST00000464454 TRNT1Q96Q11 434 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms