RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 BDKRB2P30411 391 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 ETV1P50549 477 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 CFHR3Q02985 330 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 FOXE3Q13461 319 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 SLC22A6Q4U2R8 563 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 CCDC58Q4VC31 144 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF497Q6ZNH5 498 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF439Q8NDP4 499 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 OR8U1Q8NH10 309 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 PRR25Q96S07 402 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 S1PR3Q99500 378 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF184Q99676 751 aaPredicted RBP12.61□□□□□ -0.39
COL7A1-204ENST00000462475 C9orf16Q9BUW7 83 aa12.61□□□□□ -0.39
COL7A1-204ENST00000462475 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
COL7A1-204ENST00000462475 ZMAT5Q9UDW3 170 aaKnown RBP12.61□□□□□ -0.39
COL7A1-204ENST00000462475 C12orf77C9JDV5 145 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 WBP4O75554 376 aaKnown RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 LALBAP00709 142 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 ELANEP08246 267 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 GP2P55259 537 aaKnown RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 RIPK1Q13546 671 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 KIR2DS1Q14954 304 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 OR10V1Q8NGI7 309 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 OR5M8Q8NGP6 311 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 SMIM19Q96E16 107 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 S100A13Q99584 98 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
COL7A1-204ENST00000462475 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 RCC2Q9P258 522 aaKnown RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
COL7A1-204ENST00000462475 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 RAMP3O60896 148 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
COL7A1-204ENST00000462475 GTF2F2P13984 249 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 IGFBP3P17936 291 aaPredicted RBP12.59□□□□□ -0.39
COL7A1-204ENST00000462475 VHLP40337 213 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF134P52741 427 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 ZNF137PP52743 207 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 F2RL1P55085 397 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 Q3ZCU0 254 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
COL7A1-204ENST00000462475 OR4K15Q8NH41 348 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 CYYR1Q96J86 154 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 GNG12Q9UBI6 72 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
COL7A1-204ENST00000462475 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.39
COL7A1-204ENST00000462475 STAB2Q8WWQ8 2551 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 TRBV5-5A0A0J9YX44 114 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 OGG1O15527 345 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 TXNL1O43396 289 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 IGHG4P01861 327 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 VDAC1P21796 283 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 DCKP27707 260 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 SOX6P35712 828 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 CT45A1Q5HYN5 189 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
COL7A1-204ENST00000462475 TMPRSS11AQ6ZMR5 421 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 PRR18Q8N4B5 295 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 OR8H1Q8NGG4 311 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 OR1L1Q8NH94 360 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 CT45A3Q8NHU0 189 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 C4orf3Q8WVX3 66 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 MUL1Q969V5 352 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 CLEC2DQ9UHP7 191 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 U3KQK5 164 aa12.58□□□□□ -0.4
COL7A1-204ENST00000462475 SPINT2O43291 252 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 HBZP02008 142 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
COL7A1-204ENST00000462475 SLC2A2P11168 524 aaPredicted RBP12.57□□□□□ -0.4
COL7A1-204ENST00000462475 MYF6P23409 242 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 PSMB8P28062 276 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 ECI1P42126 302 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL7A1-204ENST00000462475 FHL3Q13643 280 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 RAB12Q6IQ22 244 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 ZFP41Q8N8Y5 198 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 GHSRQ92847 366 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 KCTD7Q96MP8 289 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 SPACA1Q9HBV2 294 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 BABAM2Q9NXR7 383 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 SCOCQ9UIL1 159 aa12.57□□□□□ -0.4
COL7A1-204ENST00000462475 MRPS28Q9Y2Q9 187 aaKnown RBP12.57□□□□□ -0.4
COL7A1-204ENST00000462475 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
COL7A1-204ENST00000462475 MCRIP1C9JLW8 97 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 GPX5O75715 221 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 IGF1P05019 195 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 RCC1P18754 421 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-204ENST00000462475 ADARB1P78563 741 aaKnown RBP12.56□□□□□ -0.4
COL7A1-204ENST00000462475 LSAMPQ13449 338 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 Q499Y3 187 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms