RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 R4GN34 69 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 RAB3GAP2Q9H2M9 1393 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 KMT2EQ8IZD2 1858 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 C4orf51C9J302 202 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 ZW10O43264 779 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 CBR3O75828 277 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 IGKV4-1P06312 121 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 FBP1P09467 338 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 ZNF708P17019 499 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 C1QTNF8P60827 252 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 TSPAN31Q12999 210 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 C1DQ13901 141 aaKnown RBP1.69□□□□□ -2.14
VCL-203ENST00000461383 IGFBP7Q16270 282 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 XKRXQ6PP77 449 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 ADM2Q7Z4H4 148 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 NIT1Q86X76 327 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 DOLPP1Q86YN1 238 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 BLIDQ8IZY5 108 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 RPRMLQ8N4K4 120 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 OR5L1Q8NGL2 311 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 OR9I1Q8NGQ6 314 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 OR5K1Q8NHB7 308 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 STOML3Q8TAV4 291 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 DNAJB3Q8WWF6 145 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 CYGBQ8WWM9 190 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 HIST1H2BAQ96A08 127 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 GALMQ96C23 342 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 SLC25A44Q96H78 314 aaPredicted RBP1.69□□□□□ -2.14
VCL-203ENST00000461383 IGF2BP2-AS1Q96M15 143 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 GPR22Q99680 433 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 LLPHQ9BRT6 129 aaKnown RBP1.69□□□□□ -2.14
VCL-203ENST00000461383 ZNF426Q9BUY5 554 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 TSSK6Q9BXA6 273 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 ARL6Q9H0F7 186 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 OR2D2Q9H210 308 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 WDR54Q9H977 334 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 C15orf41Q9Y2V0 281 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 U3KQK5 164 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 MYO15BQ96JP2 1530 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 NID2Q14112 1375 aa1.69□□□□□ -2.14
VCL-203ENST00000461383 DNMT1P26358 1616 aaKnown RBP1.69□□□□□ -2.14
VCL-203ENST00000461383 NUP153P49790 1475 aaKnown RBP1.69□□□□□ -2.14
VCL-203ENST00000461383 DOCK6Q96HP0 2047 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 TRBV24-1A0A075B6N3 115 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 IGKV3D-11A0A0A0MRZ8 115 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 A0A0A6YYH2 397 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 A6NJ64 397 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 METTL15A6NJ78 407 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 VGLL3A8MV65 326 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 GGTLC3B5MD39 225 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 M0QYV0 167 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 CCRL2O00421 344 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ITGB1BP1O14713 200 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ATP8B1O43520 1251 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 STX10O60499 249 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 SH2D1AO60880 128 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ADAP1O75689 374 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ARL6IP5O75915 188 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 PSKH1P11801 424 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 HRES1P13985 223 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 CD99P14209 185 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 CFL1P23528 166 aaKnown RBP1.68□□□□□ -2.14
VCL-203ENST00000461383 CRABP1P29762 137 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 AGTR1P30556 359 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 FOXA1P55317 472 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 SLC9A3R2Q15599 337 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 IQCF2Q8IXL9 164 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 KRTCAP2Q8N6L1 136 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 OR11G2Q8NGC1 345 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 OR52E4Q8NGH9 312 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ZNRF2Q8NHG8 242 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 TM2D3Q9BRN9 247 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 RTBDNQ9BSG5 229 aaPredicted RBP1.68□□□□□ -2.14
VCL-203ENST00000461383 SPANXB1Q9NS25 103 aaPredicted RBP1.68□□□□□ -2.14
VCL-203ENST00000461383 FAM206AQ9NX38 181 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 NKIRAS1Q9NYS0 192 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 OR5V1Q9UGF6 321 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 MCTS1Q9ULC4 181 aaKnown RBP1.68□□□□□ -2.14
VCL-203ENST00000461383 WASHC3Q9Y3C0 194 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 PHLDA3Q9Y5J5 127 aa1.68□□□□□ -2.14
VCL-203ENST00000461383 ZBED9Q6R2W3 1325 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 SPATA31E1Q6ZUB1 1445 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 SLC31A1O15431 190 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 PSCAO43653 123 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 HPGDSO60760 199 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 LTAP01374 205 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CGB3P0DN86 165 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CGB7P0DN87 165 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CTSEP14091 401 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 PPP1CCP36873 323 aaKnown RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 DEFA6Q01524 100 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 SMAGPQ0VAQ4 97 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 APOFQ13790 326 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 PDK2Q15119 407 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 HLA-DRB5Q30154 266 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 TRMT12Q53H54 448 aaKnown RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 SPIN3Q5JUX0 258 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 EBLN2Q6P2I7 272 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CYHR1Q6ZMK1 362 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms