RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TPRX1Q8N7U7 411 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 GAL3ST2Q9H3Q3 398 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 GPR173Q9NS66 373 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 GLS2Q9UI32 602 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 UBE2J1Q9Y385 318 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-202ENST00000461127 OOSP1A8MZH6 123 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 MAGEB3O15480 346 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 SULT1B1O43704 296 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 IL1AP01583 271 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 GABRR1P24046 479 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 IL24Q13007 206 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 DEFB136Q30KP8 78 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 TPTE2P1Q5T6R2 138 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 ADAMTSL5Q6ZMM2 481 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 SLC35E3Q7Z769 313 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 TRMT10AQ8TBZ6 339 aaKnown RBP13.54□□□□□ -0.24
TOP3A-202ENST00000461127 PKIBQ9C010 78 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 SLC7A11Q9UPY5 501 aa13.54□□□□□ -0.24
TOP3A-202ENST00000461127 TMEM82A0PJX8 343 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 MMP23AO75900 390 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 HCKP08631 526 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 CLEC2LP0C7M8 214 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 IGFBP3P17936 291 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-202ENST00000461127 ATF1P18846 271 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 RAB3BP20337 219 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 PRKACBP22694 351 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 BDKRB2P30411 391 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 INSL3P51460 131 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 PRRX1P54821 245 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 CXorf66Q5JRM2 361 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-202ENST00000461127 PRAMEF5Q5TYX0 476 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 LRRTM1Q86UE6 522 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 THNSL2Q86YJ6 484 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 NKAIN3Q8N8D7 197 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 TMEM138Q9NPI0 162 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 PCDHB16Q9NRJ7 776 aa13.53□□□□□ -0.24
TOP3A-202ENST00000461127 AK6Q9Y3D8 172 aaKnown RBP13.53□□□□□ -0.24
TOP3A-202ENST00000461127 SHISA3A0PJX4 238 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 SMIM30A4D0T7 59 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 BUB1B-PAK6H3BSN5 160 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 FGF16O43320 207 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 JTBO76095 146 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 CDK2P24941 298 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 SOX6P35712 828 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 RPS19P39019 145 aaKnown RBP13.52□□□□□ -0.25
TOP3A-202ENST00000461127 PSMD7P51665 324 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 RBM39Q14498 530 aaKnown RBP13.52□□□□□ -0.25
TOP3A-202ENST00000461127 HLA-DRB5Q30154 266 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 DDI2Q5TDH0 399 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 GLT8D1Q68CQ7 371 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 TMEM42Q69YG0 159 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 HEPN1Q6WQI6 88 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 OVCH2Q7RTZ1 564 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 STPG2Q8N412 459 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 C5orf56Q8N8D9 126 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 OR51A2Q8NGJ7 313 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 SPSB1Q96BD6 273 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-202ENST00000461127 GON7Q9BXV9 100 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 CHST6Q9GZX3 395 aa13.52□□□□□ -0.25
TOP3A-202ENST00000461127 KIAA2026Q5HYC2 2103 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 MGST3O14880 152 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 HAND1O96004 215 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 IGHG2P01859 326 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
TOP3A-202ENST00000461127 CD34P28906 385 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-202ENST00000461127 RORCP51449 518 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 HES1Q14469 280 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 UBE2V2Q15819 145 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 PNLIPRP3Q17RR3 467 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 CNPY1Q3B7I2 92 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 DRAM1Q8N682 238 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 SLC25A46Q96AG3 418 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 RPEQ96AT9 228 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 V9GY05 133 aa13.51□□□□□ -0.25
TOP3A-202ENST00000461127 CSMD3Q7Z407 3707 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 FAM230AA0A1W2PPH8 454 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 FRMD6-AS1P0C7T7 363 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 ZNF182P17025 639 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-202ENST00000461127 TMEM11P17152 192 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
TOP3A-202ENST00000461127 FUT6P51993 359 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 P2RX3P56373 397 aa13.5□□□□□ -0.25
TOP3A-202ENST00000461127 OR10A3P58181 314 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms