RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UBE2J1Q9Y385 318 aaPredicted RBP10.6□□□□□ -0.71
LINC00959-201ENST00000456581 POMT1Q9Y6A1 747 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 IGHV3-64DA0A0J9YX35 117 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 A0A1W2PR80 420 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 H3BQ15 152 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
LINC00959-201ENST00000456581 UCP2P55851 309 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 GNMTQ14749 295 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 HERPUD1Q15011 391 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 HEPN1Q6WQI6 88 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 GCNT2Q8N0V5 402 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 SPSB1Q96BD6 273 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 APH1AQ96BI3 265 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 SSX3Q99909 188 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 GPR61Q9BZJ8 451 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 ROS1P08922 2347 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 A0A0G2JRQ6 117 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 DTYMKP23919 212 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
LINC00959-201ENST00000456581 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
LINC00959-201ENST00000456581 SOX8P57073 446 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 MALLQ13021 153 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 CNN3Q15417 329 aaKnown RBP10.59□□□□□ -0.71
LINC00959-201ENST00000456581 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF100Q8IYN0 542 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 SUCNR1Q9BXA5 334 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 CCL28Q9NRJ3 127 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 ADGRG4Q8IZF6 3080 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 hCG_38984A0A1B0GV85 526 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 PDCD6O75340 191 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 SOD3P08294 240 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 TNFSF10P50591 281 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 GPM6AP51674 278 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 RNF212Q495C1 297 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF695Q8IW36 515 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 OR1J1Q8NGS3 322 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 C10orf35Q96D05 121 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
LINC00959-201ENST00000456581 TRGV5A0A0B4J1U4 118 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 RBFOX3A6NFN3 312 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 CA11O75493 328 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 S100A8P05109 93 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 RNF224P0DH78 156 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 PAX6P26367 422 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 ECI1P42126 302 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
LINC00959-201ENST00000456581 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 Q6ZSR3 168 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 EXTL1Q92935 676 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 PRO1933Q9H354 126 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 RYDENQ9NUL5 291 aaKnown RBP10.58□□□□□ -0.72
LINC00959-201ENST00000456581 SPTBN4Q9H254 2564 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TRGC2P03986 189 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TAGLN2P37802 199 aaKnown RBP10.58□□□□□ -0.72
LINC00959-201ENST00000456581 HAAOP46952 286 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 IL13RA2Q14627 380 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 ARL6IP1Q15041 203 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 CLEC12BQ2HXU8 276 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 ZNF674Q2M3X9 581 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 GPR157Q5UAW9 335 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 CCDC54Q8NEL0 328 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 SPTA1P02549 2419 aa10.58□□□□□ -0.72
LINC00959-201ENST00000456581 TRDCB7Z8K6 153 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 CHST1O43916 411 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
LINC00959-201ENST00000456581 RAB1AP62820 205 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 DLK1P80370 383 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 CLN3Q13286 438 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 SELENOHQ8IZQ5 122 aaKnown RBP10.57□□□□□ -0.72
LINC00959-201ENST00000456581 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 HEATR1Q9H583 2144 aaKnown RBP10.57□□□□□ -0.72
LINC00959-201ENST00000456581 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 NBASA2RRP1 2371 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 IFNL4K9M1U5 179 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 LILRA1O75019 489 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 ELOBQ15370 118 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 HMGN3Q15651 99 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 SYT3Q9BQG1 590 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 PBDC1Q9BVG4 233 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 TMPRSS5Q9H3S3 457 aa10.57□□□□□ -0.72
LINC00959-201ENST00000456581 TLN1Q9Y490 2541 aaKnown RBP10.57□□□□□ -0.72
LINC00959-201ENST00000456581 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms