RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MSGN1A6NI15 193 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 A8MWP6 167 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 DNPH1O43598 174 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 P01737 135 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CEACAM5P06731 702 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 SP1P08047 785 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 F2RP25116 425 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CAMPP49913 170 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CRYBA2P53672 197 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 DEFB132Q7Z7B7 95 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MRPL43Q8N983 215 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MPC1Q9Y5U8 109 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NKX6-3A6NJ46 265 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TIMM8AO60220 97 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SPINK4O60575 86 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 AMBPP02760 352 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SLC25A5P05141 298 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TDGF1P3P51864 188 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 HERVK_113P61574 105 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 RUNX1Q01196 453 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 LYSMD4Q5XG99 296 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM136Q6ZRR5 245 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 LINC01555Q8NAE3 123 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 OR10G3Q8NGC4 313 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 OR1N1Q8NGS0 311 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 OR4C12Q96R67 309 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 RBKSQ9H477 322 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 J3QRE1 110 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NDUFB4O95168 129 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 ERGP11308 486 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 CEACAM6P40199 344 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF816Q0VGE8 651 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 FOXF1Q12946 379 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TGIF1Q15583 401 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SMIM21Q3B7S5 101 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TSPO2Q5TGU0 170 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PQLC2Q6ZP29 291 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 VN1R4Q7Z5H5 301 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 WBP2Q969T9 261 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SLC25A33Q9BSK2 321 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 DUSP23Q9BVJ7 150 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SFXN3Q9BWM7 321 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 HCFC1R1Q9NWW0 138 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 IL36BQ9NZH7 164 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 FOXD3Q9UJU5 478 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 KLHDC2Q9Y2U9 406 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 LRRC3CA6NJW4 275 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 K7N7A8 449 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 DXOO77932 396 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 IGHV2-5P01817 119 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NGFRP08138 427 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 FAM157CP0CG43 387 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 ID4P47928 161 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 MFAP2P55001 183 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SEC11AP67812 179 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 UBE2L3P68036 154 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PSG6Q00889 435 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 MYBPHQ13203 477 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SSPNQ14714 243 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 Q1RN00 199 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TTC32Q5I0X7 151 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 RPS19BP1Q86WX3 136 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 GBGT1Q8N5D6 347 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SLC37A2Q8TED4 501 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NAT6Q93015 286 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SPSB4Q96A44 273 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PERPQ96FX8 193 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 HSD17B10Q99714 261 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PKIBQ9C010 78 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TBL2Q9Y4P3 447 aaKnown RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NEUROG3Q9Y4Z2 214 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SOX21Q9Y651 276 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-203ENST00000456367 A0A1W2PRS3 328 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NPIPB13A6NJU9 1138 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NPIPB4C9JG80 1138 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TNFSF14O43557 240 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SMIM13P0DJ93 91 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 PRRX1P54821 245 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 FUT5Q11128 374 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 ICAM4Q14773 271 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 DEFB115Q30KQ5 88 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SNAI3Q3KNW1 292 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 LINC01590Q5TEZ4 76 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TEPPQ6URK8 271 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 NR2C2APQ86WQ0 139 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SPPL3Q8TCT6 385 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 C20orf144Q9BQM9 153 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 EGLN1Q9GZT9 426 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 HES4Q9HCC6 221 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 DTX4Q9Y2E6 619 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 SMCHD1A6NHR9 2005 aa4.37□□□□□ -1.71
PCDH9-203ENST00000456367 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms