RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 OR2W5A6NFC9 320 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 HLA-DRB1P01911 266 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CEBPDP49716 269 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 RPS11P62280 158 aaKnown RBP eCLIP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ZXDAP98168 799 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 IRF3Q14653 427 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ADIPOQQ15848 244 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NUDT10Q8NFP7 164 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 COX14Q96I36 57 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MAP1LC3AQ9H492 121 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 A0A0B4J293 547 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 F5H697 171 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 H3BQ15 152 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CST7O76096 145 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 FOXF1Q12946 379 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 KLF9Q13886 244 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ZIC1Q15915 447 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 KCNMB1Q16558 191 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 RIPPLY2Q5TAB7 128 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 GFRALQ6UXV0 394 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 DYRK2Q92630 601 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MISP3Q96FF7 219 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TMEM208Q9BTX3 173 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SARGQ9BW04 601 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ZNF576Q9H609 170 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 P4HTMQ9NXG6 502 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 RBBP6Q7Z6E9 1792 aaKnown RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TMEM202A6NGA9 273 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CHST1O43916 411 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 AMY1AP04745 511 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SLURP2P0DP57 97 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ASIPP42127 132 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 B2MP61769 119 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 HIST1H2BAQ96A08 127 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 FOXN4Q96NZ1 517 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TINAGL1Q9GZM7 467 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NARFLQ9H6Q4 476 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CNTD2Q9H8S5 307 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 HIGD1AQ9Y241 93 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SETD2Q9BYW2 2564 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 LOC390937A0A1W2PQ73 354 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CDX4O14627 284 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 FCMRO60667 390 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 FCGR3BO75015 233 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CD3EP07766 207 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 B4GALT1P15291 398 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CD1BP29016 333 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 B4GALNT1Q00973 533 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SLC25A35Q3KQZ1 300 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TMEM78Q5T7P6 136 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 C9orf135Q5VTT2 229 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NKAIN2Q5VXU1 208 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TMEM136Q6ZRR5 245 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MMD2Q8IY49 270 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ZNF645Q8N7E2 425 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 FADS6Q8N9I5 356 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NCOR1P1Q9H4R4 102 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TUBA4BQ9H853 241 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 PSG11Q9UQ72 335 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MAP1AP78559 2803 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ATAD5Q96QE3 1844 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 CA2P00918 260 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MAS1LP35410 378 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 DEFB103AP81534 67 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 EWSR1Q01844 656 aaKnown RBP eCLIP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 RELQ04864 619 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TMEFF1Q8IYR6 380 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TDHQ8IZJ6 230 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 PLXNB1O43157 2135 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 A0A087WWC5 75 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 LINC00587B1AMM8 73 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 DNAL4O96015 105 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 HLA-DQB1P01920 261 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 PMP22Q01453 160 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 RNFT1Q5M7Z0 435 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 LIMS2Q7Z4I7 341 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ATG4DQ86TL0 474 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 OR10J6PQ8NGY7 276 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 KCNE5Q9UJ90 142 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 INSIG2Q9Y5U4 225 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 STRCQ7RTU9 1775 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 LTBP4Q8N2S1 1624 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SCN10AQ9Y5Y9 1956 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 DIRC3C9JPN6 131 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ATP5LO75964 103 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 TNFSF15O95150 251 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 PTGDSP41222 190 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ACAA2P42765 397 aaKnown RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 NMUP48645 174 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 EMDP50402 254 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MVDP53602 400 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 MEF2BQ02080 365 aaPredicted RBP3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 PSG5Q15238 335 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ZNF788Q6ZQV5 615 aa3.54□□□□□ -1.84
PPP1R9A-208ENST00000456331 ANKRD37Q7Z713 158 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms