RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SOCS1O15524 211 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RCC1P18754 421 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-205ENST00000454542 BLVRBP30043 206 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RAG2P55895 527 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 TMEM50BP56557 158 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 HMGN3Q15651 99 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 SSX2Q16385 188 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 ZNF439Q8NDP4 499 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RFESDQ8TAC1 157 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 NDNFQ8TB73 568 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 CCDC107Q8WV48 283 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC4-205ENST00000454542 ARL11Q969Q4 196 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 PTX4Q96A99 478 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 CREB3L1Q96BA8 519 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 CHCHD6Q9BRQ6 235 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 CENPOQ9BU64 300 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 VCX3AQ9NNX9 186 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RAB9BQ9NP90 201 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 RAB22AQ9UL26 194 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 PSG11Q9UQ72 335 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 A6NDX4 124 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 CHST1O43916 411 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 TSPAN9O75954 239 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 HBZP02008 142 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 NFYBP25208 207 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 EFNB2P52799 333 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 TIMM50Q3ZCQ8 353 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 PLAC9Q5JTB6 97 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 DHRS7BQ6IAN0 325 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-205ENST00000454542 SFXN4Q6P4A7 337 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 C12orf54Q6X4T0 127 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 MOB1BQ7L9L4 216 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 OR56B1Q8NGI3 324 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 FAAP24Q9BTP7 215 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
HDAC4-205ENST00000454542 AMMECR1Q9Y4X0 333 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-205ENST00000454542 A0A0B4J203 849 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 A0A1B0GUS0 222 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 SMIM30A4D0T7 59 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 POM121CA8CG34 1229 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 RAB27BO00194 218 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 SDCBPO00560 298 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-205ENST00000454542 MFNGO00587 321 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 TOR1AO14656 332 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-205ENST00000454542 MDKP21741 143 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-205ENST00000454542 SDC2P34741 201 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 VEGFCP49767 419 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 ZNF137PP52743 207 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 PRRX1P54821 245 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 SCAND1P57086 179 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 Q6ZSV7 163 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 OR4F5Q8NH21 305 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 OR1L1Q8NH94 360 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 UBALD1Q8TB05 177 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 LEAP2Q969E1 77 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 PECRQ9BY49 303 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 RANBP3Q9H6Z4 567 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-205ENST00000454542 TAF9BQ9HBM6 251 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 AK3Q9UIJ7 227 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
HDAC4-205ENST00000454542 LOC100506127A0A0U1RQW1 187 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 A0A1W2PPI3 338 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 SPINT2O43291 252 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 CRYBA1P05813 215 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 CEACAM3P40198 252 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 HTD2P86397 168 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 HABP2Q14520 560 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-205ENST00000454542 LY6EQ16553 131 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 LTC4SQ16873 150 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 MOGAT2Q3SYC2 334 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 PLA1AQ53H76 456 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 LY6G6FQ5SQ64 297 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 FAM53AQ6NSI3 398 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-205ENST00000454542 CCBE1Q6UXH8 406 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-205ENST00000454542 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
HDAC4-205ENST00000454542 OR13F1Q8NGS4 319 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 RIMS4Q9H426 269 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-205ENST00000454542 C12orf4Q9NQ89 552 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 PLEKHJ1Q9NW61 149 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 JPT1Q9UK76 154 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 KCNK7Q9Y2U2 307 aa11.39□□□□□ -0.59
HDAC4-205ENST00000454542 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 TMEM127O75204 238 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 CLEC2LP0C7M8 214 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 GNG10P50151 68 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-205ENST00000454542 MADCAM1Q13477 382 aa11.38□□□□□ -0.59
HDAC4-205ENST00000454542 FBLN7Q53RD9 439 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms