RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MRPS18BQ9Y676 258 aaKnown RBP16.31■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF205O95201 554 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 COL9A1P20849 921 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 DOLPP1Q86YN1 238 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 MRGPRDQ8TDS7 321 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 NPDC1Q9NQX5 325 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-203ENST00000445220 IL19Q9UHD0 177 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 IGHV1OR15-9A0A0B4J2B8 117 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 HLA-DQA1P01909 254 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 NMUP48645 174 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 GNG10P50151 68 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 KCNK7Q9Y2U2 307 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 UQCRFS1P47985 274 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 MEOX1P50221 254 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 GDF15Q99988 308 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 F5H697 171 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 FZD5Q13467 585 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF260Q3ZCT1 412 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 OR2M3Q8NG83 312 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 WISP3O95389 354 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-203ENST00000445220 GLIPR1P48060 266 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 SLC25A38Q96DW6 304 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 MGAT2Q10469 447 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 TEX30Q5JUR7 227 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM183AQ8IXX5 376 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 ZBTB34Q8NCN2 500 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 STXBP6Q8NFX7 210 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 OR1B1Q8NGR6 318 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM38BQ9NVV0 291 aa16.3■□□□□ 0.2
SHANK3-203ENST00000445220 FSTP19883 344 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 RND3P61587 244 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
SHANK3-203ENST00000445220 ERVFRD-1P60508 538 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 MKRN2OSH3BPM6 223 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 LYZP61626 148 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 ACER2Q5QJU3 275 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 ANKRD37Q7Z713 158 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 OR13G1Q8NGZ3 307 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 PERPQ96FX8 193 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 SDHCQ99643 169 aaPredicted RBP16.29■□□□□ 0.2
SHANK3-203ENST00000445220 GFRA3O60609 400 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 KIR3DL2P43630 455 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 WDR25Q64LD2 544 aaPredicted RBP16.29■□□□□ 0.2
SHANK3-203ENST00000445220 FAM117AQ9C073 453 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
SHANK3-203ENST00000445220 A0A1B0GV72 72 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 NDUFB4O95168 129 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 LAIR2Q6ISS4 152 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 TEPPQ6URK8 271 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 OR1L1Q8NH94 360 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 MYOZ3Q8TDC0 251 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 ABHD14BQ96IU4 210 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 ABHD14AQ9BUJ0 271 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 SF3B6Q9Y3B4 125 aaKnown RBP16.28■□□□□ 0.2
SHANK3-203ENST00000445220 UFC1Q9Y3C8 167 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 KLF7O75840 302 aaPredicted RBP16.28■□□□□ 0.2
SHANK3-203ENST00000445220 PSG6Q00889 435 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 LRRC10Q5BKY1 277 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 C1QL3Q5VWW1 255 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 GUSBP11Q6P575 273 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 APCDD1LQ8NCL9 501 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 NDUFB3O43676 98 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 EPHA8P29322 1005 aaPredicted RBP16.28■□□□□ 0.2
SHANK3-203ENST00000445220 P2RY4P51582 365 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 MRPL18Q9H0U6 180 aaKnown RBP16.28■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM140Q9NV12 185 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 TRBV5-5A0A0J9YX44 114 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF137PP52743 207 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 DMRTA1Q5VZB9 504 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 OR2Z1Q8NG97 314 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 OR1K1Q8NGR3 316 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 VSTM2AQ8TAG5 236 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 PGLYRP3Q96LB9 341 aa16.28■□□□□ 0.2
SHANK3-203ENST00000445220 ZNF256Q9Y2P7 627 aaPredicted RBP16.28■□□□□ 0.2
SHANK3-203ENST00000445220 DANCRP0C864 163 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 RNF224P0DH78 156 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 HIST1H1BP16401 226 aaKnown RBP16.27■□□□□ 0.2
SHANK3-203ENST00000445220 GALNSP34059 522 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 MPLP40238 635 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 PMELP40967 661 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 ZFP36L2P47974 494 aaKnown RBP16.27■□□□□ 0.2
SHANK3-203ENST00000445220 DLX1P56177 255 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 LAMTOR1Q6IAA8 161 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 MRPL37Q9BZE1 423 aaKnown RBP16.27■□□□□ 0.2
SHANK3-203ENST00000445220 CHST5Q9GZS9 411 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 CISD1Q9NZ45 108 aaKnown RBP16.27■□□□□ 0.2
SHANK3-203ENST00000445220 DSPPQ9NZW4 1301 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 OR4C46A6NHA9 309 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 ORM1P02763 201 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 PSG2P11465 335 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 PPP1CCP36873 323 aaKnown RBP16.27■□□□□ 0.2
SHANK3-203ENST00000445220 SLC36A1Q7Z2H8 476 aa16.27■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM238LA0A1B0GVL6 79 aa16.27■□□□□ 0.19
SHANK3-203ENST00000445220 A0A1W2PQD3 144 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms