RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 OR8J3Q8NGG0 315 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 OR4S2Q8NH73 311 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 GNPDA2Q8TDQ7 276 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ABHD3Q8WU67 409 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PYURFQ96I23 114 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 OR4K3Q96R72 315 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 OR5M11Q96RB7 305 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 RSPO3Q9BXY4 272 aaPredicted RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 MS4A8Q9BY19 250 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ZBP1Q9H171 429 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 NANOGQ9H9S0 305 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 LRTM1Q9HBL6 345 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 UBQLN4Q9NRR5 601 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 SPANXCQ9NY87 97 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 RASL12Q9NYN1 266 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ZNF581Q9P0T4 197 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 RSL24D1Q9UHA3 163 aaKnown RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 PKIGQ9Y2B9 76 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 YTHDF2Q9Y5A9 579 aaKnown RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 HEBP2Q9Y5Z4 205 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 WSB1Q9Y6I7 421 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PALLDQ8WX93 1383 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 IGHV1-69DA0A0B4J2H0 117 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 E7EQ34 232 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 SAP18O00422 153 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 ZNF780AO75290 641 aaPredicted RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 MMP23AO75900 390 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 ZBTB25P24278 435 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 SDC4P31431 198 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 CD70P32970 193 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 PHBP35232 272 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 MEOX2P50222 304 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 UBE2NP61088 152 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 IFITM3Q01628 133 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 CD47Q08722 323 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 IAH1Q2TAA2 248 aaPredicted RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 CENPWQ5EE01 88 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 FBXW9Q5XUX1 488 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 LINC00173Q6ZV60 143 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 ZNF550Q7Z398 422 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 ZCCHC24Q8N2G6 241 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 LRRC18Q8N456 261 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 ST6GALNAC3Q8NDV1 305 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 OR4M1Q8NGD0 313 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 OR52L1Q8NGH7 329 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 OR9A2Q8NGT5 310 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 OR5J2Q8NH18 312 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 RXFP4Q8TDU9 374 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 LINC00477Q96M19 166 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 CNBD2Q96M20 576 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 PPP1R2P1Q96PQ5 205 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 OR52B2Q96RD2 323 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 EBF4Q9BQW3 602 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 VPS25Q9BRG1 176 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 PBDC1Q9BVG4 233 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 MRPL20Q9BYC9 149 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 TPT1P8Q9HAU6 139 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 RBFOX1Q9NWB1 397 aaKnown RBP3.39□□□□□ -1.87
VPS50-206ENST00000443443 ENPP4Q9Y6X5 453 aa3.39□□□□□ -1.87
VPS50-206ENST00000443443 SOGA1O94964 1423 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 A0A1B0GV90 55 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 TMEM150BA6NC51 233 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ATP6V1G2-DDX39BF2Z307 99 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 MFSD11O43934 449 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 OR2J2O76002 312 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 KCNK2O95069 426 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 EPPINO95925 133 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 TRBV12-3P01733 135 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 FABP3P05413 133 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 CRYBA1P05813 215 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 PFN1P07737 140 aaKnown RBP3.38□□□□□ -1.87
VPS50-206ENST00000443443 BPGMP07738 259 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 PRTN3P24158 256 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 COX7A1P24310 79 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 S100PP25815 95 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 IL2RGP31785 369 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 CA5AP35218 305 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 MAP2K4P45985 399 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 SLC25A1P53007 311 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 RUNX1Q01196 453 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ADIGQ0VDE8 80 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 RUNX3Q13761 415 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 RGNQ15493 299 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 Q499Y3 187 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 C6orf99Q4VX62 202 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 FAM201AQ5SY85 155 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 KDM4DQ6B0I6 523 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 C20orf196Q8IYI0 205 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 OR10G6Q8NH81 332 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms