RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 C16orf82Q7Z2V1 217 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 GAPTQ8N292 157 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 AKR1E2Q96JD6 320 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 TM2D1Q9BX74 207 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 GFOD1Q9NXC2 390 aa12.2□□□□□ -0.46
LIMS3-201ENST00000437679 WNK1Q9H4A3 2382 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 TMEM14DPA8MWL7 114 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 M0QZ24 198 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 ARSBP15848 533 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 CD24P25063 80 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 UNC119Q13432 240 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 P2RY14Q15391 338 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
LIMS3-201ENST00000437679 Q6ZTK2 550 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 OR2W3Q7Z3T1 314 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 GFI1Q99684 422 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
LIMS3-201ENST00000437679 KCNK15Q9H427 330 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 LIN7BQ9HAP6 207 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 NDUFB11Q9NX14 153 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 KCNIP1Q9NZI2 227 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 LRRC42Q9Y546 428 aa12.19□□□□□ -0.46
LIMS3-201ENST00000437679 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 A0A1W2PPE3 182 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 PDCD5O14737 125 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 CHATP28329 748 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
LIMS3-201ENST00000437679 RAB7AP51149 207 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 LOXL3P58215 753 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 QRFPP83859 136 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 HERPUD1Q15011 391 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 Q3ZCU0 254 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 Q8N2B8 174 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 PRR18Q8N4B5 295 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 FCGR1BQ92637 280 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 SLC25A33Q9BSK2 321 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 GNG12Q9UBI6 72 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 V9GY05 133 aa12.18□□□□□ -0.46
LIMS3-201ENST00000437679 TRDV1A0A1B0GX56 115 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 CCRL2O00421 344 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 PEX14O75381 377 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 OR2F2O95006 317 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 HBZP02008 142 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
LIMS3-201ENST00000437679 MYL9P24844 172 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 IL3RAP26951 378 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 PSMB9P28065 219 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 BLCAPP62952 87 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 HABP2Q14520 560 aaPredicted RBP12.17□□□□□ -0.46
LIMS3-201ENST00000437679 UBE2UQ5VVX9 321 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 TREML4Q6UXN2 200 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 C6orf201Q7Z4U5 140 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 OR8H3Q8N146 312 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 LINC00311Q8N616 119 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 C8orf31Q8N9H6 132 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 OR1L1Q8NH94 360 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
LIMS3-201ENST00000437679 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
LIMS3-201ENST00000437679 SULT4A1Q9BR01 284 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
LIMS3-201ENST00000437679 PLEKHJ1Q9NW61 149 aa12.17□□□□□ -0.46
LIMS3-201ENST00000437679 PKD1L1Q8TDX9 2849 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 TRAV1-2A0A0B4J238 106 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 GAPDHP04406 335 aaKnown RBP12.16□□□□□ -0.46
LIMS3-201ENST00000437679 GALP22466 123 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 CLDN12P56749 244 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 DIAPH2-AS1Q14236 149 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 CD200R1LQ6Q8B3 271 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 THNSL2Q86YJ6 484 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 DRAM1Q8N682 238 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 OR10V1Q8NGI7 309 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 OR56B4Q8NH76 319 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 FAM3DQ96BQ1 224 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 CHMP1AQ9HD42 196 aaPredicted RBP12.16□□□□□ -0.46
LIMS3-201ENST00000437679 SERTAD4Q9NUC0 356 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
LIMS3-201ENST00000437679 TET2Q6N021 2002 aaPredicted RBP12.16□□□□□ -0.46
LIMS3-201ENST00000437679 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
LIMS3-201ENST00000437679 A0A1W2PPI3 338 aa12.15□□□□□ -0.46
LIMS3-201ENST00000437679 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.46
LIMS3-201ENST00000437679 M0QZK8 103 aa12.15□□□□□ -0.46
LIMS3-201ENST00000437679 HSD17B6O14756 317 aa12.15□□□□□ -0.46
LIMS3-201ENST00000437679 LPLP06858 475 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms