RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ZNF133P52736 654 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-203ENST00000434376 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 ZNF695Q8IW36 515 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 ZFP62Q8NB50 900 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-203ENST00000434376 IGHV3-43A0A0B4J1X8 118 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 IGHV3-43DP0DP04 118 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 ERRFI1Q9UJM3 462 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-203ENST00000434376 NKX2-6A6NCS4 301 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
SCARF1-203ENST00000434376 TK1P04183 234 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 FBP1P09467 338 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 CTSSP25774 331 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 LINC00205P59089 165 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 FOXF2Q12947 444 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 EDDM3AQ14507 147 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 SLC35G3Q8N808 338 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 POC1AQ8NBT0 407 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 DMBX1Q8NFW5 382 aa13.32□□□□□ -0.28
SCARF1-203ENST00000434376 BORCS7-ASMTA0A0B4J1R7 106 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 CXorf65A6NEN9 183 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 WRBO00258 174 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 NXPH2O95156 264 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 IL18BPO95998 194 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 PPYP01298 95 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 CFPP27918 469 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 USF2Q15853 346 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 PEAR1Q5VY43 1037 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 SLC25A24Q6NUK1 477 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 ZPBPQ9BS86 351 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 COL5A1P20908 1838 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 FAM189A2Q15884 450 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 SPINK9Q5DT21 86 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 CXorf66Q5JRM2 361 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 GPR87Q9BY21 358 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 OR1A1Q9P1Q5 309 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 TRAPPC2LQ9UL33 140 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 A0A1B0GV90 55 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 SLC34A2O95436 690 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 TBPP20226 339 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 RAB5CP51148 216 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 HIST1H3AP68431 136 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 HIST2H3PS2Q5TEC6 136 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 PRAMEF6Q5VXH4 476 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 APOBEC3DQ96AK3 386 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 TMPRSS5Q9H3S3 457 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 C19orf12Q9NSK7 152 aa13.31□□□□□ -0.28
SCARF1-203ENST00000434376 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
SCARF1-203ENST00000434376 TRBV6-7A0A0A0MS04 114 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 TUSC2O75896 110 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 MBPP02686 304 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-203ENST00000434376 HOXC12P31275 282 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 RPS2P15880 293 aaKnown RBP13.3□□□□□ -0.28
SCARF1-203ENST00000434376 SSX9Q7RTT3 188 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 TBC1D26Q86UD7 250 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 LHFPL1Q86WI0 220 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 RPRMLQ8N4K4 120 aa13.3□□□□□ -0.28
SCARF1-203ENST00000434376 AGAP20933 346 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 UBE2KP61086 200 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 GFI1BQ5VTD9 330 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 OR1K1Q8NGR3 316 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 SLC25A40Q8TBP6 338 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 ZNF107Q9UII5 783 aaPredicted RBP13.29□□□□□ -0.28
SCARF1-203ENST00000434376 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
SCARF1-203ENST00000434376 CACNA1AO00555 2505 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
SCARF1-203ENST00000434376 TAAR5O14804 337 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 DEGS1O15121 323 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 ADAM20O43506 726 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 IAPPP10997 89 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 SNCAP37840 140 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 ZNF818PQ6ZRF7 136 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 C21orf140B9A014 251 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 RIPPLY2Q5TAB7 128 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 SYT3Q9BQG1 590 aa13.29□□□□□ -0.28
SCARF1-203ENST00000434376 OPN3Q9H1Y3 402 aaPredicted RBP13.29□□□□□ -0.28
SCARF1-203ENST00000434376 CYB5BO43169 146 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 PYY3Q5JQD4 70 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 DEFB108BQ8NET1 73 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 PBDC1Q9BVG4 233 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
SCARF1-203ENST00000434376 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 DNAJB11Q9UBS4 358 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 RUNX1Q01196 453 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 FBXW9Q5XUX1 488 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 OR10V1Q8NGI7 309 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 POM121L2Q96KW2 1035 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
SCARF1-203ENST00000434376 GPR61Q9BZJ8 451 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms