RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 H0YHG0 523 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 RGS11O94810 467 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 LALBAP00709 142 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 MGMTP16455 207 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-211ENST00000430454 RPS11P62280 158 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC9-211ENST00000430454 CD83Q01151 205 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 TRAM1Q15629 374 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 KPRPQ5T749 579 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-211ENST00000430454 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 BAIAP2L2Q6UXY1 529 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 C1QL4Q86Z23 238 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 LYG1Q8N1E2 194 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 ZFP41Q8N8Y5 198 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 ZNF485Q8NCK3 441 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 OR13C5Q8NGS8 318 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 WIPF2Q8TF74 440 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-211ENST00000430454 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 SGCDQ92629 289 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 TFAP2CQ92754 450 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 DPF1Q92782 380 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 LEAP2Q969E1 77 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 NEDD4LQ96PU5 975 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 ZFP57Q9NU63 452 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 NECAP2Q9NVZ3 263 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 GFOD1Q9NXC2 390 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 ABRACLQ9P1F3 81 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 RCC2Q9P258 522 aaKnown RBP7.28□□□□□ -1.24
HDAC9-211ENST00000430454 TGP01266 2768 aa7.28□□□□□ -1.24
HDAC9-211ENST00000430454 A0A1W2PPI3 338 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 A0A1W2PPK0 400 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 NCBP2LA6PVI3 153 aaKnown RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 PTGES3LE9PB15 166 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 G3V4G9 280 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 RRP9O43818 475 aaKnown RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 MOSP00540 346 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 IGKV1D-33P01593 117 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 IGKV1-33P01594 117 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 IGHV3-7P01780 117 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 CDK1P06493 297 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 GNAO1P09471 354 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 PSMA1P25786 263 aaKnown RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 CD1BP29016 333 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 SLC35A2P78381 396 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 GABPB1Q06547 395 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 HNF4GQ14541 408 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 SPHARQ15513 63 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 BEAN1Q3B7T3 259 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 ACSM3Q53FZ2 586 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 HSD17B12Q53GQ0 312 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 SYT6Q5T7P8 510 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 SLC35E3Q7Z769 313 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 TGIF2LXQ8IUE1 241 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 IZUMO1Q8IYV9 350 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 KCNG3Q8TAE7 436 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 FBLIM1Q8WUP2 373 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 UFD1Q92890 307 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 RASL11BQ9BPW5 248 aa7.27□□□□□ -1.25
HDAC9-211ENST00000430454 MCRIP2Q9BUT9 160 aaKnown RBP7.27□□□□□ -1.25
HDAC9-211ENST00000430454 TRAV39A0A0B4J263 110 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 IGHV1-3A0A0C4DH29 117 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 C12orf77C9JDV5 145 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 C15orf65H3BRN8 121 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 AP4M1O00189 453 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 PDCD6O75340 191 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 ARL6IP5O75915 188 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 HSPA13P48723 471 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 PSMD7P51665 324 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 GP2P55259 537 aaKnown RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 EBI3Q14213 229 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 MED22Q15528 200 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 RBM48Q5RL73 367 aaKnown RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 C6orf141Q5SZD1 244 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 Q6ZS46 218 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 CEACAM19Q7Z692 300 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 PRR18Q8N4B5 295 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 C5orf56Q8N8D9 126 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 RTN4IP1Q8WWV3 396 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 GALMQ96C23 342 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 ORAI1Q96D31 301 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 URM1Q9BTM9 101 aaKnown RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 GHITMQ9H3K2 345 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 RIMS4Q9H426 269 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 BANF2Q9H503 90 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 OR2S2Q9NQN1 319 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 LIN7CQ9NUP9 197 aaKnown RBP7.26□□□□□ -1.25
HDAC9-211ENST00000430454 FKBP14Q9NWM8 211 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 STEAP1Q9UHE8 339 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 JPT1Q9UK76 154 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 BLOC1S6Q9UL45 172 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 MGAT4AQ9UM21 535 aa7.26□□□□□ -1.25
HDAC9-211ENST00000430454 KIAA2026Q5HYC2 2103 aa7.25□□□□□ -1.25
HDAC9-211ENST00000430454 A0A1W2PPE3 182 aa7.25□□□□□ -1.25
HDAC9-211ENST00000430454 NUDT19A8MXV4 375 aa7.25□□□□□ -1.25
HDAC9-211ENST00000430454 LANCL1O43813 399 aa7.25□□□□□ -1.25
HDAC9-211ENST00000430454 SC5DO75845 299 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms