RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 A0A1W2PPE3 182 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 OGG1O15527 345 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 MT-ND4P03905 459 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 IGFBP3P17936 291 aaPredicted RBP13.67□□□□□ -0.22
DDR1-235ENST00000428153 RIPK1Q13546 671 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 GPR50Q13585 617 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
DDR1-235ENST00000428153 GAPTQ8N292 157 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 OR5M8Q8NGP6 311 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 ZNF581Q9P0T4 197 aa13.67□□□□□ -0.22
DDR1-235ENST00000428153 TRAV39A0A0B4J263 110 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 TRBV5-5A0A0J9YX44 114 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 AIPO00170 330 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 SPINT2O43291 252 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 CA11O75493 328 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 IGHG4P01861 327 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 IGF1P05019 195 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 OR5H8P0DN80 308 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 SERPINA2P20848 420 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 REG1BP48304 166 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 CFHR3Q02985 330 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 ATAD3CQ5T2N8 411 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 C9orf66Q5T8R8 295 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 XAF1Q6GPH4 301 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 TRAT1Q6PIZ9 186 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 CDH26Q8IXH8 852 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 FAM71E2Q8N5Q1 922 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 S1PR3Q99500 378 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 RASL11BQ9BPW5 248 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 BABAM2Q9NXR7 383 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 CKLFQ9UBR5 152 aa13.66□□□□□ -0.22
DDR1-235ENST00000428153 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 FAM90A10PA6NDY2 464 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 FAM90A7PA6NKC0 464 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 LINC01548A6NM66 108 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 FAM90A23PA8MXZ1 464 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 MCRIP1C9JLW8 97 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
DDR1-235ENST00000428153 GLAP06280 429 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 FSTP19883 344 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 ETV1P50549 477 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 SLC22A6Q4U2R8 563 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 YIF1BQ5BJH7 314 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 ZNF554Q86TJ5 538 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 ZNF439Q8NDP4 499 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 ZNF184Q99676 751 aaPredicted RBP13.65□□□□□ -0.22
DDR1-235ENST00000428153 CHCHD3Q9NX63 227 aaKnown RBP13.65□□□□□ -0.22
DDR1-235ENST00000428153 EXOSC1Q9Y3B2 195 aaKnown RBP13.65□□□□□ -0.22
DDR1-235ENST00000428153 RYR3Q15413 4870 aa13.65□□□□□ -0.22
DDR1-235ENST00000428153 WBP4O75554 376 aaKnown RBP13.64□□□□□ -0.23
DDR1-235ENST00000428153 VDAC1P21796 283 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 SOX6P35712 828 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 MED21Q13503 144 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 Q499Y3 187 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 C4orf3Q8WVX3 66 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
DDR1-235ENST00000428153 DIMT1Q9UNQ2 313 aaKnown RBP13.64□□□□□ -0.23
DDR1-235ENST00000428153 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
DDR1-235ENST00000428153 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 LANCL1O43813 399 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 SC5DO75845 299 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 MYL12AP19105 171 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 PSMB8P28062 276 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 VHLP40337 213 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 FHL3Q13643 280 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
DDR1-235ENST00000428153 OR2G6Q5TZ20 316 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 DMKNQ6E0U4 476 aaPredicted RBP13.63□□□□□ -0.23
DDR1-235ENST00000428153 LCNL1Q6ZST4 164 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 CCDC107Q8WV48 283 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 GHSRQ92847 366 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 S100A14Q9HCY8 104 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
DDR1-235ENST00000428153 IGHV3-43A0A0B4J1X8 118 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 A0A1W2PP11 408 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 IGHV3-43DP0DP04 118 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 INSL3P51460 131 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 SMN1Q16637 294 aaKnown RBP13.62□□□□□ -0.23
DDR1-235ENST00000428153 CT45A1Q5HYN5 189 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 CT45A3Q8NHU0 189 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 TFAP2CQ92754 450 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
DDR1-235ENST00000428153 MBNL3Q9NUK0 354 aaKnown RBP13.62□□□□□ -0.23
DDR1-235ENST00000428153 SMPD3Q9NY59 655 aaPredicted RBP13.62□□□□□ -0.23
DDR1-235ENST00000428153 SLC31A2O15432 143 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 HBZP02008 142 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 ZNF134P52741 427 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 RAB25P57735 213 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 TAS2R43P59537 309 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 RPS11P62280 158 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDR1-235ENST00000428153 LSAMPQ13449 338 aa13.61□□□□□ -0.23
DDR1-235ENST00000428153 LY6G6FQ5SQ64 297 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms