RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 GTF2A1P52655 376 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 SLURP1P55000 103 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 IL13RA2Q14627 380 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 XAF1Q6GPH4 301 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 PACRGLQ8N7B6 248 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF439Q8NDP4 499 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 Q8NFD4 153 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 PXT1Q8NFP0 134 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 RASL11BQ9BPW5 248 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 ALG8Q9BVK2 526 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 C8orf4Q9NR00 106 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 SMPD3Q9NY59 655 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 ZMAT5Q9UDW3 170 aaKnown RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 OR7C1O76099 320 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-203ENST00000420503 LYL1P12980 280 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 GABRB1P18505 474 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
LINC00339-203ENST00000420503 SOX6P35712 828 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 NDPQ00604 133 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 PAX5Q02548 391 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 TMED1Q13445 227 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 GNMTQ14749 295 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 KLHL22Q53GT1 634 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 SLC25A30Q5SVS4 291 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF529Q6P280 563 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 OR1L1Q8NH94 360 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 TRUB1Q8WWH5 349 aaKnown RBP9.97□□□□□ -0.81
LINC00339-203ENST00000420503 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-203ENST00000420503 RFKQ969G6 155 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 GPER1Q99527 375 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 AMBNQ9NP70 447 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 FAM118AQ9NWS6 357 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF107Q9UII5 783 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-203ENST00000420503 ST3GAL6Q9Y274 331 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 FBXO7Q9Y3I1 522 aa9.97□□□□□ -0.81
LINC00339-203ENST00000420503 LOC100130705A0A1B0GUX0 176 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 C12orf77C9JDV5 145 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.82
LINC00339-203ENST00000420503 SOX15O60248 233 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 IGF1P05019 195 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 SERPINA2P20848 420 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 CD1BP29016 333 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.82
LINC00339-203ENST00000420503 SNRPGP62308 76 aaKnown RBP9.96□□□□□ -0.82
LINC00339-203ENST00000420503 ADARB1P78563 741 aaKnown RBP9.96□□□□□ -0.82
LINC00339-203ENST00000420503 RSU1Q15404 277 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 ASCL4Q6XD76 172 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 SERPINA12Q8IW75 414 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 ACBD7Q8N6N7 88 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 OR10A7Q8NGE5 316 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 OR5D14Q8NGL3 314 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 OR13C5Q8NGS8 318 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 NRG4Q8WWG1 115 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 ING4Q9UNL4 249 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 DHDHQ9UQ10 334 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
LINC00339-203ENST00000420503 GMPPBQ9Y5P6 360 aa9.96□□□□□ -0.82
LINC00339-203ENST00000420503 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 A0A087WW49 117 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 SAP30O75446 220 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 MT-ND4P03905 459 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 GP9P14770 177 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 RAB3AP20336 220 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 BLVRBP30043 206 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 LSAMPQ13449 338 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 RIPK1Q13546 671 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 MMDQ15546 238 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 SRSF7Q16629 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00339-203ENST00000420503 ATAD3CQ5T2N8 411 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 SLC16A12Q6ZSM3 486 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 SLC25A48Q6ZT89 311 aaKnown RBP9.95□□□□□ -0.82
LINC00339-203ENST00000420503 KCTD20Q7Z5Y7 419 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 OR5AK2Q8NH90 309 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 ARPC1AQ92747 370 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 JAM3Q9BX67 310 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 IMPAD1Q9NX62 359 aa9.95□□□□□ -0.82
LINC00339-203ENST00000420503 SIRT4Q9Y6E7 314 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-203ENST00000420503 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 AIPO00170 330 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 OVOL1O14753 267 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 OR8U8P0C7N1 319 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 GALEQ14376 348 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms