RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 P4HA3Q7Z4N8 544 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CDC20BQ86Y33 519 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CALHM1Q8IU99 346 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 APRG1Q8IVJ8 170 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 BAP18Q8IXM2 172 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 DND1Q8IYX4 353 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2L13Q8N349 312 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 Q8N377 158 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM99Q8N816 258 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZFP41Q8N8Y5 198 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2Y1Q8NGV0 311 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SYNPRQ8TBG9 265 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RNASEH2CQ8TDP1 164 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 BAALCQ8WXS3 180 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM37Q8WXS4 190 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RASL10AQ92737 203 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 BADQ92934 168 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PTH2Q96A98 100 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ISOC2Q96AB3 205 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPEQ96AT9 228 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC25A38Q96DW6 304 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PIK3IP1Q96FE7 263 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMIM8Q96KF7 97 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 DERL3Q96Q80 235 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMIM14Q96QK8 99 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 GPX7Q96SL4 187 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 STACQ99469 402 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 LPAR4Q99677 370 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 MCHR1Q99705 422 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TIMM29Q9BSF4 260 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RSPO3Q9BXY4 272 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC17A9Q9BYT1 436 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHIAQ9BZP6 476 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 NMES1Q9C002 83 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 FXYD6Q9H0Q3 95 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR52D1Q9H346 318 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 GLIPR2Q9H4G4 154 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SPHK2Q9NRA0 654 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CA10Q9NS85 328 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CUTCQ9NTM9 273 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 C1orf123Q9NWV4 160 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SIGLEC8Q9NYZ4 499 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TECRQ9NZ01 308 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TREM2Q9NZC2 230 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 IL36GQ9NZH8 169 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5V1Q9UGF6 321 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PILRAQ9UKJ1 303 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SIGLEC7Q9Y286 467 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 MED31Q9Y3C7 131 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SELENOKQ9Y6D0 94 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM14AQ9Y6G1 99 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 R4GN57 208 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PLXNB3Q9ULL4 1909 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 DOCK6Q96HP0 2047 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CCDC88CQ9P219 2028 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRAV14DV4A0A0A6YYC5 116 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 TRBV9A0A0B4J1U6 114 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NPIPA5A0A0B4J1W7 369 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1B0GW64 132 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 GLTPD2A6NH11 291 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 COLCA2A8K830 154 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CEACAM18A8MTB9 384 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NPIPA5E9PKD4 350 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 H3BMH7 237 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CDC42EP2O14613 210 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAMP3O60896 148 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 MED6O75586 246 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NDUFB2O95178 105 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 GJB5O95377 273 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 FGF19O95750 216 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 IGHV2-5P01817 119 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 HMGN2P05204 90 aaKnown RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CRYBA1P05813 215 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD14P08571 375 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NBEAP1P0C6P0 100 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF806P0C7X5 589 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF35P13682 527 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIST1H1TP22492 207 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CDK2P24941 298 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPL35P42766 123 aaKnown RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 GLP1RP43220 463 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 MAGEA5P43359 124 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PPICP45877 212 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SGSHP51688 502 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NCBP2P52298 156 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF136P52737 540 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 FGF8P55075 233 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR12D2P58182 307 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 TAS2R60P59551 318 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAB8AP61006 207 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 STXBP1P61764 594 aaKnown RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 AESQ08117 197 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 FUT5Q11128 374 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SMCO1Q147U7 214 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RHEBQ15382 184 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZIC1Q15915 447 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF77Q15935 545 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms