RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 Q3ZCU0 254 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 SIGIRRQ6IA17 410 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 Q6ZTK2 550 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 GAPTQ8N292 157 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 AKR1E2Q96JD6 320 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 GFI1Q99684 422 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 LPAR5Q9H1C0 372 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 GNG12Q9UBI6 72 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 HSF4Q9ULV5 492 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 MGAT4AQ9UM21 535 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
CHD1-202ENST00000414220 LOC100506127A0A0U1RQW1 187 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 CLPSL1A2RUU4 121 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 NOTOA8MTQ0 251 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 RGS11O94810 467 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 CFPP27918 469 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 VEGFCP49767 419 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 GNG10P50151 68 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 SHISA2Q6UWI4 295 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 C6orf201Q7Z4U5 140 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 OR4C13Q8NGP0 309 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 SULT4A1Q9BR01 284 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 CHCHD6Q9BRQ6 235 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 FAAP24Q9BTP7 215 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 OR51E2Q9H255 320 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 LIN7BQ9HAP6 207 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 PSG11Q9UQ72 335 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 TCF19Q9Y242 345 aa11.89□□□□□ -0.51
CHD1-202ENST00000414220 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 C12orf77C9JDV5 145 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 C15orf65H3BRN8 121 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 RAB6AP20340 208 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 MDKP21741 143 aaPredicted RBP11.88□□□□□ -0.51
CHD1-202ENST00000414220 RAB7AP51149 207 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 OR10A3P58181 314 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 OLFML2AQ68BL7 652 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 BAIAP2L2Q6UXY1 529 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 MOB1BQ7L9L4 216 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 C8orf31Q8N9H6 132 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 SETD6Q8TBK2 473 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 MRPL30Q8TCC3 161 aaKnown RBP11.88□□□□□ -0.51
CHD1-202ENST00000414220 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 PTX4Q96A99 478 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 GALMQ96C23 342 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 ZNF747Q9BV97 191 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
CHD1-202ENST00000414220 ZNF696Q9H7X3 374 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
CHD1-202ENST00000414220 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
CHD1-202ENST00000414220 SOCS1O15524 211 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 TMEM127O75204 238 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 TSPAN9O75954 239 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 SCGNO76038 276 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 HBZP02008 142 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 RCC1P18754 421 aaPredicted RBP11.87□□□□□ -0.51
CHD1-202ENST00000414220 PAX6P26367 422 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 RAB13P51153 203 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 C11orf88Q6PI97 169 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 C16orf82Q7Z2V1 217 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 DYNAPQ8N1N2 210 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 PHF21AQ96BD5 680 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 CMSS1Q9BQ75 279 aaKnown RBP11.87□□□□□ -0.51
CHD1-202ENST00000414220 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 KCNK15Q9H427 330 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 C16orf95Q9H693 158 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 RNF114Q9Y508 228 aa11.87□□□□□ -0.51
CHD1-202ENST00000414220 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
CHD1-202ENST00000414220 CD3GP09693 182 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 SDC2P34741 201 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 HTD2P86397 168 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
CHD1-202ENST00000414220 STEAP3Q658P3 488 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 Q6ZSV7 163 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 CROCCP3Q8IVE0 287 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 LEAP2Q969E1 77 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 RAB3CQ96E17 227 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
CHD1-202ENST00000414220 IGHV3-43A0A0B4J1X8 118 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 A6NDX4 124 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 LY6LH3BQJ8 138 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms