RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 GNG10P50151 68 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 DYNLT3P51808 116 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 SLC16A12Q6ZSM3 486 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 MMP28Q9H239 520 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 MMP24Q9Y5R2 645 aa13.16□□□□□ -0.3
NOD1-202ENST00000411552 A0A0B4J203 849 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 FOXI3A8MTJ6 420 aaPredicted RBP13.15□□□□□ -0.3
NOD1-202ENST00000411552 F2RL2O00254 374 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 SDCBPO00560 298 aaPredicted RBP13.15□□□□□ -0.3
NOD1-202ENST00000411552 SPINT2O43291 252 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 CHST1O43916 411 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 CD36P16671 472 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 LOXL3P58215 753 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
NOD1-202ENST00000411552 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 Q6ZSV7 163 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 OR52M1Q8NGK5 317 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 OR1L1Q8NH94 360 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 CHCHD6Q9BRQ6 235 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 BEX1Q9HBH7 125 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
NOD1-202ENST00000411552 PLEKHJ1Q9NW61 149 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
NOD1-202ENST00000411552 IGHV3-43A0A0B4J1X8 118 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 LOC100506127A0A0U1RQW1 187 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 HBZP02008 142 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 IGHV3-43DP0DP04 118 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 CEACAM3P40198 252 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 VEGFCP49767 419 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 CCBE1Q6UXH8 406 aaPredicted RBP13.14□□□□□ -0.31
NOD1-202ENST00000411552 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 KCTD7Q96MP8 289 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 RNF167Q9H6Y7 350 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 LIN7BQ9HAP6 207 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 TAF9BQ9HBM6 251 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 RAB18Q9NP72 206 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 RAB9BQ9NP90 201 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 GFOD1Q9NXC2 390 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
NOD1-202ENST00000411552 AMMECR1Q9Y4X0 333 aaPredicted RBP13.14□□□□□ -0.31
NOD1-202ENST00000411552 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 CLPSL1A2RUU4 121 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 A6NDX4 124 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 NAPSAO96009 420 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 SLC2A2P11168 524 aaPredicted RBP13.13□□□□□ -0.31
NOD1-202ENST00000411552 SDC2P34741 201 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 EFNB2P52799 333 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 TMEM50BP56557 158 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 OLFML2AQ68BL7 652 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 Q6ZPA2 131 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 TPRA1Q86W33 373 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 LINC01006Q8NI28 216 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 ARHGAP5-AS1Q96IT6 56 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 KCNIP1Q9NZI2 227 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 AK3Q9UIJ7 227 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
NOD1-202ENST00000411552 TRIM64CA6NLI5 447 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 NOTOA8MTQ0 251 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 TSPAN9O75954 239 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 MADCAM1Q13477 382 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 OR56B1Q8NGI3 324 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 OR10X1Q8NGY0 326 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 RPEQ96AT9 228 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 PECRQ9BY49 303 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 CHMP1AQ9HD42 196 aaPredicted RBP13.12□□□□□ -0.31
NOD1-202ENST00000411552 GNG12Q9UBI6 72 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 PITPNC1Q9UKF7 332 aa13.12□□□□□ -0.31
NOD1-202ENST00000411552 OOSP1A8MZH6 123 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 RAB6AP20340 208 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 CD24P25063 80 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 BRS3P32247 399 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 ARHGDIBP52566 201 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 MXD1Q05195 221 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 DIAPH2-AS1Q14236 149 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 MOGAT2Q3SYC2 334 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 PLAC9Q5JTB6 97 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 Q6ZTK2 550 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
NOD1-202ENST00000411552 ZNF439Q8NDP4 499 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms