RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 C18orf12Q96KH6 178 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 KPTNQ9Y664 436 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 TM4SF5O14894 197 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 DEDDO75618 318 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 UBE2NP61088 152 aaKnown RBP12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 PKIAP61925 76 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 NCMAPQ5T1S8 102 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 LIAT1Q6ZQX7 453 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 ZNF818PQ6ZRF7 136 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM58AQ8N1B3 248 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 PRSS33Q8NF86 280 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 UBALD1Q8TB05 177 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 SMIM3Q9BZL3 60 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 ZDHHC8Q9ULC8 765 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 TP53TG5Q9Y2B4 290 aa12.9□□□□□ -0.34
SCAMP4-202ENST00000409472 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 RAB4AP20338 218 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF573Q86YE8 665 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 FAM96BQ9Y3D0 163 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 TRAV17A0A0B4J275 112 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 A6NLC8 198 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 HOXA5P20719 270 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 IL24Q13007 206 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 Q6ZT83 130 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 DPPA2Q7Z7J5 298 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 GAPTQ8N292 157 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 CDH20Q9HBT6 801 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 FZR1Q9UM11 496 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 AMDHD2Q9Y303 409 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 RP1L1Q8IWN7 2480 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-202ENST00000409472 TNFSF12O43508 249 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 IFNA21P01568 189 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PET100P0DJ07 73 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 UCP3P55916 312 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PSG7Q13046 419 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 C1QL4Q86Z23 238 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 SCCPDHQ8NBX0 429 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 OR1J1Q8NGS3 322 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 DLL3Q9NYJ7 618 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PLA2G2EQ9NZK7 142 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 LPAR3Q9UBY5 353 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 KCNIP3Q9Y2W7 256 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 A0A087X0M5 115 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 A0A1B0GX30 115 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 J3QT63 122 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 K7EPK0 472 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 SIRPB1O00241 398 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 AQP7O14520 342 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 CDIPTO14735 213 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 HSD17B6O14756 317 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 RPL12P30050 165 aaKnown RBP12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 CASP6P55212 293 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF154Q13106 437 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 SPIN3Q5JUX0 258 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 Q6P435 159 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PCSK4Q6UW60 755 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 Q6ZS49 121 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 FAM71E2Q8N5Q1 922 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 PRRX2Q99811 253 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 LUZP4Q9P127 313 aa12.88□□□□□ -0.35
SCAMP4-202ENST00000409472 C3orf85A0A1B0GTC6 90 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 TRDCB7Z8K6 153 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 H7C1Q1 480 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 MPPED1O15442 326 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 TFF1P04155 84 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 LRTM2Q8N967 370 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 OPN3Q9H1Y3 402 aaPredicted RBP12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 DNAJB11Q9UBS4 358 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 CACFD1Q9UGQ2 172 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 K7EM74 188 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms