RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ERGIC1Q969X5 290 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 NEIL1Q96FI4 390 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-205ENST00000397611 SH3BGRL3Q9H299 93 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 IGHV3-20A0A0C4DH32 117 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 WIPF3A6NGB9 483 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 BMPR1BO00238 502 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 OR5G3P0C626 314 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 FUT3P21217 361 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 VDAC1P21796 283 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 GFERP55789 205 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 SHBQ15464 509 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 DEFB133Q30KQ1 61 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 SMRP1Q8NCR6 262 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 C22orf15Q8WYQ4 148 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 CDH20Q9HBT6 801 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 ST3GAL6Q9Y274 331 aa4.75□□□□□ -1.65
PTPRD-205ENST00000397611 CNOT1A5YKK6 2376 aaKnown RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 GJE1A6NN92 205 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 K7ERU9 68 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF207O43670 478 aaKnown RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 COX5BP10606 129 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF708P17019 499 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 HOXA5P20719 270 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 EDDM3BP56851 147 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ELOBQ15370 118 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 RBMXL3Q8N7X1 1067 aaKnown RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 FAM122AQ96E09 287 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ADAT3Q96EY9 351 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 Q96M66 194 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 RPP25Q9BUL9 199 aaKnown RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF253O75346 499 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 NRASP01111 189 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 HRASP01112 189 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 KRASP01116 189 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 CHRNB4P30926 498 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 CLDN15P56746 228 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 FAM3BP58499 235 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 PLPPR5Q32ZL2 321 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 IFI44Q8TCB0 444 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 GSX1Q9H4S2 264 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 MCTS1Q9ULC4 181 aaKnown RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 C4orf47A7E2U8 309 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 MYOGP15173 224 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 GPM6AP51674 278 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF816Q0VGE8 651 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 TRA2AQ13595 282 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 STPG1Q5TH74 334 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 SAXO1Q8IYX7 474 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 IER3P46695 156 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 RRADP55042 308 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 STARD6P59095 220 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 PPP1CAP62136 330 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ZXDAP98168 799 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 TNFRSF9Q07011 255 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 SPINK9Q5DT21 86 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM183AQ8IXX5 376 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 MRGPRFQ96AM1 343 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 DUSP23Q9BVJ7 150 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 OBP2BQ9NPH6 170 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 RARRES3Q9UL19 164 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 LRRK1Q38SD2 2015 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 SERTM2A0A1B0GWG4 89 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 CRYAAP02489 173 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 DANCRP0C864 163 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 TCN2P20062 427 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 KISS1Q15726 138 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 MST1LQ2TV78 715 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 Q56UQ5 140 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 VWA1Q6PCB0 445 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 LHFPL2Q6ZUX7 228 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-205ENST00000397611 GINS3Q9BRX5 216 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 IGHV3-64DA0A0J9YX35 117 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 A0A1W2PNR3 127 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ACTL6BO94805 426 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 RAC1P63000 192 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 PRAMEF5Q5TYX0 476 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 PRAMEF6Q5VXH4 476 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 OSR2Q8N2R0 312 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 OR13G1Q8NGZ3 307 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 OR1L3Q8NH93 324 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 GNG12Q9UBI6 72 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 VAX2Q9UIW0 290 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 SCN3AQ9NY46 2000 aa4.74□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM265A0A087WTH1 108 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 IGHV1OR15-9A0A0B4J2B8 117 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 NKX2-6A6NCS4 301 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 C11orf94C9JXX5 98 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 PDCD6O75340 191 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 FOXF1Q12946 379 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 IL24Q13007 206 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 LANCL3Q6ZV70 420 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 FBXL14Q8N1E6 418 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CALHM2Q9HA72 323 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MPDZO75970 2070 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 COLCA2A8K830 154 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 M0R135 149 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms