RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 C9orf16Q9BUW7 83 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 ING4Q9UNL4 249 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 LSM4Q9Y4Z0 139 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 GPX5O75715 221 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 RPLP1P05386 114 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 GTF2F2P13984 249 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 DCKP27707 260 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 BDKRB2P30411 391 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 REG1BP48304 166 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 DDI2Q5TDH0 399 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 GAPTQ8N292 157 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 STX19Q8N4C7 294 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 RASL11BQ9BPW5 248 aa13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 RCC2Q9P258 522 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-202ENST00000394082 IGHV3-72A0A0B4J1Y9 119 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 OGG1O15527 345 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 OR5H8P0DN80 308 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 VSIG8P0DPA2 414 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 FHL3Q13643 280 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 TMPRSS11AQ6ZMR5 421 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF439Q8NDP4 499 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 C4orf3Q8WVX3 66 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 APH1BQ8WW43 257 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 SMIM19Q96E16 107 aa13.7□□□□□ -0.22
SNRPA1-202ENST00000394082 AIPO00170 330 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 CA11O75493 328 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 SERPINA2P20848 420 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 VDAC1P21796 283 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 PSMB8P28062 276 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 SOX6P35712 828 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 VHLP40337 213 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 RIPK1Q13546 671 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 ATAD3CQ5T2N8 411 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 TRAT1Q6PIZ9 186 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 LCNL1Q6ZST4 164 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 CDH26Q8IXH8 852 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 MYOZ3Q8TDC0 251 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 BABAM2Q9NXR7 383 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 U3KQK5 164 aa13.69□□□□□ -0.22
SNRPA1-202ENST00000394082 TRBV5-5A0A0J9YX44 114 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 IRGMA1A4Y4 181 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 MCRIP1C9JLW8 97 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 SPINT2O43291 252 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 LANCL1O43813 399 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 GLAP06280 429 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 INSL3P51460 131 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 C6orf183Q5T699 404 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF554Q86TJ5 538 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 RDH12Q96NR8 316 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 SLC29A1Q99808 456 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 CKLFQ9UBR5 152 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 SCOCQ9UIL1 159 aa13.68□□□□□ -0.22
SNRPA1-202ENST00000394082 FAM90A10PA6NDY2 464 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 FAM90A7PA6NKC0 464 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 FAM90A23PA8MXZ1 464 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 C12orf77C9JDV5 145 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 SC5DO75845 299 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 FSTP19883 344 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 ETV1P50549 477 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF134P52741 427 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 RAB25P57735 213 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 RUNX1Q01196 453 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 SLC22A6Q4U2R8 563 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 YIF1BQ5BJH7 314 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 CT45A1Q5HYN5 189 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 CT45A3Q8NHU0 189 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 CCDC107Q8WV48 283 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 HSPB9Q9BQS6 159 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 TRAPPC2LQ9UL33 140 aa13.67□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF736B4DX44 427 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 SEC14L6B5MCN3 397 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 F2RL1P55085 397 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 DEFB136Q30KP8 78 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 Q499Y3 187 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 OR2G6Q5TZ20 316 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 DMKNQ6E0U4 476 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 GHSRQ92847 366 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 UBE2E2Q96LR5 201 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 KCTD7Q96MP8 289 aa13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 MBNL3Q9NUK0 354 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 DIMT1Q9UNQ2 313 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-202ENST00000394082 IGHV3-43A0A0B4J1X8 118 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 A0A1W2PP11 408 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 SLC31A2O15432 143 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 HBZP02008 142 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 IGHV3-43DP0DP04 118 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 CHATP28329 748 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms