RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CHMP1AQ9HD42 196 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-204ENST00000393546 MBNL3Q9NUK0 354 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-204ENST00000393546 DPM3Q9P2X0 92 aa15.39■□□□□ 0.05
PDLIM7-204ENST00000393546 LEUTXA8MZ59 168 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 C12orf77C9JDV5 145 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 SDCBPO00560 298 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 IGLV1-47P01700 117 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 CRYBA1P05813 215 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 PAX6P26367 422 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 HLA-DRB5Q30154 266 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 ZNF554Q86TJ5 538 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 SPATA3Q8NHX4 192 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 UBALD1Q8TB05 177 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 FUNDC2Q9BWH2 189 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 PECRQ9BY49 303 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 TAF9BQ9HBM6 251 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 AK3Q9UIJ7 227 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 PSG11Q9UQ72 335 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 HILPDAQ9Y5L2 63 aa15.38■□□□□ 0.05
PDLIM7-204ENST00000393546 TMEM89A2RUT3 159 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 FAM181BA6NEQ2 426 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 H3BUX3 64 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 J3QR06 171 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 F2RL2O00254 374 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 IGHV3-7P01780 117 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 HBZP02008 142 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 HKR1P10072 659 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 CEACAM3P40198 252 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 TMEM30BQ3MIR4 351 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 IDNKQ5T6J7 187 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 PRR18Q8N4B5 295 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 OR10R2Q8NGX6 335 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 LEAP2Q969E1 77 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 RAB3CQ96E17 227 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 ATG5Q9H1Y0 275 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 MMP28Q9H239 520 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 ABCB10Q9NRK6 738 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 GFOD1Q9NXC2 390 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 VPREB3Q9UKI3 123 aa15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 AMMECR1Q9Y4X0 333 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-204ENST00000393546 VGLL3A8MV65 326 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 BUB1B-PAK6H3BSN5 160 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 GPR137BO60478 399 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 TMEM127O75204 238 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 NAPSAO96009 420 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 SNRPBP14678 240 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 RPL15P61313 204 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 PLA1AQ53H76 456 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 PLAC9Q5JTB6 97 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 UTF1Q5T230 341 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 CROCCP3Q8IVE0 287 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 OR1L1Q8NH94 360 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 SETD6Q8TBK2 473 aa15.36■□□□□ 0.05
PDLIM7-204ENST00000393546 IGHV3-43A0A0B4J1X8 118 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 IGHV3-43DP0DP04 118 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 TGFBR1P36897 503 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 GNG10P50151 68 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 LOXL3P58215 753 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 MRPS15P82914 257 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 MOGAT2Q3SYC2 334 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 ZNF880Q6PDB4 577 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 CMSS1Q9BQ75 279 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 ABRACLQ9P1F3 81 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 GNG12Q9UBI6 72 aa15.35■□□□□ 0.05
PDLIM7-204ENST00000393546 TRBV6-6A0A0A6YYG2 114 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 POM121CA8CG34 1229 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 RAB27BO00194 218 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 CD3GP09693 182 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 RPS19P39019 145 aaKnown RBP15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 DYNLT3P51808 116 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 ARHGDIBP52566 201 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 SCAND1P57086 179 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 FOXL1Q12952 345 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 ARL6IP1Q15041 203 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 LY6EQ16553 131 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 Q3ZCU0 254 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 TPTE2P1Q5T6R2 138 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 MOB1BQ7L9L4 216 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 OR10X1Q8NGY0 326 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 LGALS14Q8TCE9 139 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 GALMQ96C23 342 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 C12orf4Q9NQ89 552 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 MGAT4AQ9UM21 535 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 ETV7Q9Y603 341 aa15.34■□□□□ 0.05
PDLIM7-204ENST00000393546 OOSP1A8MZH6 123 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 LY6LH3BQJ8 138 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 SCGNO76038 276 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 BRS3P32247 399 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 RAB13P51153 203 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 HTD2P86397 168 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 HMGN3Q15651 99 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 CCDC144NLQ6NUI1 221 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 C12orf54Q6X4T0 127 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 ANKRD13BQ86YJ7 626 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 LINC00311Q8N616 119 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 C8orf31Q8N9H6 132 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 PIFOQ8TCI5 191 aa15.33■□□□□ 0.04
PDLIM7-204ENST00000393546 HDHD3Q9BSH5 251 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms