RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SNX22Q96L94 193 aa9.32□□□□□ -0.92
BRF1-204ENST00000392557 DEFB127Q9H1M4 99 aa9.32□□□□□ -0.92
BRF1-204ENST00000392557 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
BRF1-204ENST00000392557 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
BRF1-204ENST00000392557 LOC102725191A0A1B0GVB3 256 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 TRDCB7Z8K6 153 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 K7N7A8 449 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 SCAF4O95104 1147 aaKnown RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 TMEM11P17152 192 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 FUT6P51993 359 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 SRPXP78539 464 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 TESK1Q15569 626 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 PYY3Q5JQD4 70 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 ZNF880Q6PDB4 577 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 HEPN1Q6WQI6 88 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 EDARADDQ8WWZ3 215 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 GNPNAT1Q96EK6 184 aaPredicted RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 C18orf12Q96KH6 178 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 FOXB1Q99853 325 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 DOCK11Q5JSL3 2073 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 SPTBN1Q01082 2364 aaKnown RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 ARHGAP21Q5T5U3 1957 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 ZNF705GA8MUZ8 300 aaPredicted RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 SLC34A2O95436 690 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 CD200P41217 278 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 GTF3C1Q12789 2109 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 ADIRFQ15847 76 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 KCNMB1Q16558 191 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 SSX9Q7RTT3 188 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 ZNF100Q8IYN0 542 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 TINAGQ9UJW2 476 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 GAB2Q9UQC2 676 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 MAP1AP78559 2803 aaPredicted RBP9.31□□□□□ -0.92
BRF1-204ENST00000392557 ADGRG4Q8IZF6 3080 aa9.31□□□□□ -0.92
BRF1-204ENST00000392557 FOXI3A8MTJ6 420 aaPredicted RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 IGHV2-5P01817 119 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 ERVFRD-1P60508 538 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 PSG4Q00888 419 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 C10orf128Q5T292 105 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 MRPL21Q7Z2W9 205 aaKnown RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 FAM210BQ96KR6 192 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 FAM173AQ9BQD7 235 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 SEBOXQ9HB31 216 aaPredicted RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 FOXD3Q9UJU5 478 aaPredicted RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 COL12A1Q99715 3063 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 METTL15P1P0C7V9 234 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 MMP9P14780 707 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 BCL3P20749 454 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 RPS16P62249 146 aaKnown RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 FOXO1Q12778 655 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 SRSF6Q13247 344 aaKnown RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 FAM27BQ5VT28 67 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 C16orf54Q6UWD8 224 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 OR56B2PQ8NGI1 322 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 SSC4DQ8WTU2 575 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 LOXL4Q96JB6 756 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 GPR87Q9BY21 358 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 TTTY12Q9BZ98 90 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 GLRX2Q9NS18 164 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 KIAA1456Q9P272 454 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 IL36RNQ9UBH0 155 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 HSF4Q9ULV5 492 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 ZNF816-ZNF321PA0A0X1KG74 233 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 TRAPPC2LH3BP13 241 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 ST8SIA5O15466 376 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 CDS2O95674 445 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 PAX6P26367 422 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 ARG2P78540 354 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 HLA-DRB3P79483 266 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 OR8G2PQ6IF36 304 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 TUSC5Q8IXB3 177 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 C1orf87Q8N0U7 546 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 MUCL1Q96DR8 90 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 HEATR1Q9H583 2144 aaKnown RBP9.3□□□□□ -0.92
BRF1-204ENST00000392557 C12orf49Q9H741 205 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 ZNF665Q9H7R5 613 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 TMEM38BQ9NVV0 291 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 PPP1R3CQ9UQK1 317 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 MUC6Q6W4X9 2439 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 PCSK5Q92824 1860 aa9.3□□□□□ -0.92
BRF1-204ENST00000392557 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 C5orf49A4QMS7 147 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 PROB1E7EW31 1015 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 PHOX2AO14813 284 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 SYNGR4O95473 234 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 HBE1P02100 147 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms