RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 ELK4P28324 431 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 CRABP2P29373 138 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 SPAM1P38567 509 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 ACTR1BP42025 376 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 STC1P52823 247 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 DLX6P56179 175 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 KRTAP12-3P60328 96 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 ACTBP60709 375 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 ACTG1P63261 375 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 MEF2BQ02080 365 aaPredicted RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 SKP2Q13309 424 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 APOFQ13790 326 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 SYCP1Q15431 976 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 USF2Q15853 346 aaPredicted RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 EXOC3L4Q17RC7 722 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 HENMT1Q5T8I9 393 aaKnown RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 PDPK2PQ6A1A2 396 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 HCP5Q6MZN7 132 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 VN1R4Q7Z5H5 301 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 COMTD1Q86VU5 262 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 FUNDC1Q8IVP5 155 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 PACRGLQ8N7B6 248 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 OR7G1Q8NGA0 311 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 MFSD8Q8NHS3 518 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 DNAJB3Q8WWF6 145 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 OR5P3Q8WZ94 311 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 APOBEC3DQ96AK3 386 aaPredicted RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 RAD51AP1Q96B01 352 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 CLDN23Q96B33 292 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 CMBLQ96DG6 245 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 ZNF514Q96K75 400 aaPredicted RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 OR8B2Q96RD0 313 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 HBEGFQ99075 208 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 NDEL1Q9GZM8 345 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 CHST5Q9GZS9 411 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 C1orf109Q9NX04 203 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 RPUSD1Q9UJJ7 312 aaKnown RBP0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 TRAPPC1Q9Y5R8 145 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 GMEB1Q9Y692 573 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 KIAA0232Q92628 1395 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 RAB3GAP2Q9H2M9 1393 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 ARAP3Q8WWN8 1544 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 NACADO15069 1562 aa0.77□□□□□ -2.29
TRAJ41-201ENST00000390496 NUMA1Q14980 2115 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 KIAA2026Q5HYC2 2103 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 GREB1Q4ZG55 1949 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 PLXNA3P51805 1871 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ADGRL1O94910 1474 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 SSH2Q76I76 1423 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 BRD4O60885 1362 aaPredicted RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 TRBV24-1A0A075B6N3 115 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 LOC102725191A0A1B0GVB3 256 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 IGSF23A1L1A6 192 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 METTL15A6NJ78 407 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 C17orf98A8MV24 154 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 C9J4A7 227 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 F5H5T6 163 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 F8VZ95 297 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 K7EQS6 105 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 EEF1E1O43324 174 aaKnown RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ATP8B1O43520 1251 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CYTH3O43739 400 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 SOX14O95416 240 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ATP6V1G2O95670 118 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 RAB36O95755 333 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 GUSBP08236 651 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CTSGP08311 255 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CTSEP14091 401 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ORM2P19652 201 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CXCL2P19875 107 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 PVALBP20472 110 aaPredicted RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 GABRA3P34903 492 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 PPP1CCP36873 323 aaKnown RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CBX5P45973 191 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 NUDT2P50583 147 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 DAPP51397 102 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 GABARAPL2P60520 117 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 PSG4Q00888 419 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 SMAGPQ0VAQ4 97 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 TSPAN31Q12999 210 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 HES1Q14469 280 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 OR8G1Q15617 311 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ZCWPW2Q504Y3 356 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 TRMT12Q53H54 448 aaKnown RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 FAM45BPQ6NSW5 357 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 Q6ZQT7 251 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CRLF3Q8IUI8 442 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 ZFAND2AQ8N6M9 145 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 FER1L6-AS1Q8NA97 138 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 LFNGQ8NES3 379 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 OR8A1Q8NGG7 326 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 OR5L1Q8NGL2 311 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 OR4P4Q8NGL7 312 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 CCDC12Q8WUD4 166 aaPredicted RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 PPCDCQ96CD2 204 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 OR52B2Q96RD2 323 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 C7orf50Q9BRJ6 194 aaKnown RBP0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 TSGA10Q9BZW7 698 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 WDR54Q9H977 334 aa0.76□□□□□ -2.29
TRAJ41-201ENST00000390496 IMP3Q9NV31 184 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms