RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 UBQLN2Q9UHD9 624 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 KCNMB2Q9Y691 235 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 COL27A1Q8IZC6 1860 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-201ENST00000379433 hCG_38984A0A1B0GV85 526 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 IKZF1Q13422 519 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 FBXW9Q5XUX1 488 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 IL1F10Q8WWZ1 152 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 ARHGAP21Q5T5U3 1957 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 TACC2O95359 2948 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 SNAI2O43623 268 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 CRYBA1P05813 215 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 CD80P33681 288 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 S100A10P60903 97 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 HIST1H3AP68431 136 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 PDZK1IP1Q13113 114 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 HNF4GQ14541 408 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 MEF2DQ14814 521 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 HIST2H3PS2Q5TEC6 136 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 RGS7BPQ6MZT1 257 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 HIST2H3AQ71DI3 136 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 TERB2Q8NHR7 220 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 SLC25A21Q9BQT8 299 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 DLL3Q9NYJ7 618 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 COMMD9Q9P000 198 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 ONECUT1Q9UBC0 465 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 OR14J1Q9UGF5 321 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 A6NNC1 897 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 G3V3Q6 166 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 MFNGO00587 321 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 SIGLEC5O15389 551 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 NXPH3O95157 252 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 EXOSC2Q13868 293 aaKnown RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 RNPS1Q15287 305 aaKnown RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 ATP6V1FQ16864 119 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 OSR2Q8N2R0 312 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 STPG2Q8N412 459 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 LRFN3Q9BTN0 628 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 NKX6-2Q9C056 277 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 MAGT1Q9H0U3 335 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 LRBAP50851 2863 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 CYB5BO43169 146 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 OPCMLQ14982 345 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 SPIN3Q5JUX0 258 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 UNQ6126/PRO20091Q6UXV3 157 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 RELL2Q8NC24 303 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-201ENST00000379433 PPP1R1CQ8WVI7 109 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 RAB1BQ9H0U4 201 aa9.26□□□□□ -0.93
NEDD9-201ENST00000379433 LOC102724200A0A096LPH7 203 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-201ENST00000379433 OR5H14A6NHG9 310 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 CD300LBA8K4G0 201 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF44P15621 663 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 MAS1LP35410 378 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 RAG2P55895 527 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 UBE2KP61086 200 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 OR8G2PQ6IF36 304 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 FOXL2NBQ6ZUU3 175 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 OR13G1Q8NGZ3 307 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 SNIP1Q8TAD8 396 aaKnown RBP9.25□□□□□ -0.93
NEDD9-201ENST00000379433 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 WDR13Q9H1Z4 485 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM160Q9NX00 188 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 DUSP13Q9UII6 198 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 HSF4Q9ULV5 492 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 TRAV17A0A0B4J275 112 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 S100A2P29034 98 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 OR5L1Q8NGL2 311 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 C5orf66Q9H5L9 145 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 CDH20Q9HBT6 801 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 TNFSF12O43508 249 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 ACTL6AO96019 429 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 OR5H8P0DN80 308 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 RAP2BP61225 183 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 SURF2Q15527 256 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-201ENST00000379433 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 ZSCAN4Q8NAM6 433 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-201ENST00000379433 MSL2Q9HCI7 577 aa9.25□□□□□ -0.93
NEDD9-201ENST00000379433 IGKV3D-15A0A087WSY6 115 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 ANKRD30BLA7E2S9 258 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 SNRPGP15A8MWD9 76 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 PRR33A8MZF0 331 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 XRCC2O43543 280 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 IGHV1-2P23083 117 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 FUT6P51993 359 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 OR2W3Q7Z3T1 314 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM144Q7Z5S9 345 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 PTX4Q96A99 478 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 APOBEC3DQ96AK3 386 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-201ENST00000379433 SPSB1Q96BD6 273 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 NTNG2Q96CW9 530 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 PLPPR2Q96GM1 343 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 OR2S2Q9NQN1 319 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms